Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0183
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 3.3
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 3.3
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 3.3
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 4.3
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 4.3
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 27 5.7
AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical... 27 5.7
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 27 5.7
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 27 7.5
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 28.7 bits (61), Expect = 1.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 36 CRNRHEDSRDAGHKHEDNHLFVYYRHRGNGS 128
C +++ R HK ED +F+Y R++ N +
Sbjct: 286 CEWKYDGERGQIHKREDGQIFIYSRNQENNT 316
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 197 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 72
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 90 DCLHVCGLRLSNPRADSCSPGDP 22
DC H C +L +P SC DP
Sbjct: 634 DCAHKCSCKLCDPSTGSCRCEDP 656
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 90 DCLHVCGLRLSNPRADSCSPGDP 22
DC H C +L +P SC DP
Sbjct: 634 DCAHKCSCKLCDPSTGSCRCEDP 656
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -3
Query: 195 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 76
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -3
Query: 195 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 76
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 219 KALSXSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 389
++L S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 390 VELKMANKVYV 422
VE+ +ANKVY+
Sbjct: 81 VEVYLANKVYL 91
>AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical
protein F44E7.7 protein.
Length = 473
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 209 LFFTTSVNILAVKLSFPFLSTLE 141
LFF S +L V + FPFL+T E
Sbjct: 443 LFFIVSGIVLIVNIPFPFLTTAE 465
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 219 KALSXSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 389
++L S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 390 VELKMANKVYV 422
VE+ +ANKVY+
Sbjct: 81 VEVYLANKVYL 91
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 150 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSN 55
H ++ G H DG K+ N C GLRLS+
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSD 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,431,499
Number of Sequences: 27780
Number of extensions: 181424
Number of successful extensions: 582
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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