Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0182
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    27   0.13 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.13 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.53 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.53 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 415 IYKNLEFGIDLDTRL-ALVGPNGAGKSTLLKLL 510
           I KN+ FG+     L A++G +GAGK+TLL  L
Sbjct: 93  ILKNV-FGVAYPGELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 415 IYKNLEFGIDLDTRL-ALVGPNGAGKSTLLKLL 510
           I KN+ FG+     L A++G +GAGK+TLL  L
Sbjct: 93  ILKNV-FGVAYPGELLAILGSSGAGKTTLLNTL 124


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 118 FVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQS-KEKTLAKMVAQGL 294
           F   +  LLEN++     +++++ + +NY   FG+    L + A+S KE +L  +V + L
Sbjct: 133 FQSLQFRLLENKLGVR--QENRVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWL 190


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 118 FVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQS-KEKTLAKMVAQGL 294
           F   +  LLEN++     +++++ + +NY   FG+    L + A+S KE +L  +V + L
Sbjct: 133 FQSLQFRLLENKLGVR--QENRVKYNQNYSKVFGNDEKALEQIAKSEKEPSLTDLVQRWL 190


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 475 WVQPKQVLYQGQCQIPNSCISTAQ 404
           W +   +  Q  C +PNSC  T +
Sbjct: 471 WKEKCDIKGQPYCSLPNSCALTTR 494


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 475 WVQPKQVLYQGQCQIPNSCISTAQ 404
           W +   +  Q  C +PNSC  T +
Sbjct: 478 WKEKCDIKGQPYCSLPNSCALTTR 501


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 204 VVFHMCNLVLFPVVLFHLIL 145
           + +H+CN V+   V F ++L
Sbjct: 156 IQYHICNTVISATVCFMMLL 175


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 204 VVFHMCNLVLFPVVLFHLIL 145
           + +H+CN V+   V F ++L
Sbjct: 152 IQYHICNTVISATVCFMMLL 171


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 495 ATQAALWRFSAFDWYDP*KLTSSYWSLP 578
           A    L RF    +     L SSYW +P
Sbjct: 377 AADELLRRFHEIRYMSTIDLRSSYWQIP 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,385
Number of Sequences: 336
Number of extensions: 3831
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)