Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0182
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 158 6e-40
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 137 1e-33
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 130 2e-31
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 67 2e-12
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 67 2e-12
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 47 3e-06
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 45 8e-06
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 40 3e-04
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 38 0.001
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 38 0.001
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 36 0.004
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 36 0.005
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 36 0.007
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 34 0.015
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 34 0.015
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 33 0.035
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 31 0.11
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 28 1.0
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 28 1.3
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 28 1.3
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 27 1.8
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 24 1.9
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 27 2.3
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 27 2.3
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 2.3
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 3.1
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 3.1
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 26 4.0
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 26 5.3
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 26 5.3
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 26 5.3
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 26 5.3
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 5.3
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 26 5.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 7.1
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 25 7.1
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 7.1
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 25 7.1
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 25 7.1
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 25 7.1
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 25 9.3
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 9.3
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 25 9.3
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 25 9.3
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 25 9.3
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 9.3
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 158 bits (384), Expect = 6e-40
Identities = 81/179 (45%), Positives = 119/179 (66%), Gaps = 2/179 (1%)
Frame = +1
Query: 46 NGVCTNIVHM-SKRRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGH 222
N VCTNI+ + SK++L YY GN++ ++RT+ E NQMK Y +Q++IAH+K +IA G
Sbjct: 281 NNVCTNIIDLTSKKQLVYYGGNFDIYMRTKEENETNQMKAYLKQQEEIAHIKKFIASAGT 340
Query: 223 GSAKLARQAQSKEKTLAKMVAQGLTEKVVDDKILNFYFPSCGKVPPPVIMVQNVSFRYTD 402
A L RQA+SK+K + KM A GL EK + +F F K+PPP+I +V+F Y
Sbjct: 341 -YANLVRQAKSKQKIIDKMEAAGLVEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSYDG 399
Query: 403 S-GPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLRIGRY 576
+ +Y++L FGID+D+R+A+VG NG GKSTLL L+ G L+P G + + S L++ +Y
Sbjct: 400 NLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKY 458
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 385 SFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLK 504
S+ + G + +N ++ R L+G NG+GKST L+
Sbjct: 80 SYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLE 119
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 137 bits (332), Expect = 1e-33
Identities = 68/200 (34%), Positives = 116/200 (58%)
Frame = +1
Query: 46 NGVCTNIVHMSKRRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHG 225
N V T+I+H RL YY GN+ F TR E +NQ+++Y + + H++++I +F +
Sbjct: 415 NEVATDIIHQHSERLDYYKGNFSQFYATREERCKNQLREYEKQMEYRKHLQSFIDKFRYN 474
Query: 226 SAKLARQAQSKEKTLAKMVAQGLTEKVVDDKILNFYFPSCGKVPPPVIMVQNVSFRYTDS 405
+AK + +AQS+ K L K+ + EK ++ + F FP K+ PP++ + +V+F Y
Sbjct: 475 AAK-SSEAQSRIKKLEKLP---ILEKPQTEEEVEFEFPPVEKISPPILQMSDVNFEYVPG 530
Query: 406 GPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLRIGRYXXX 585
P I K+++ + +D+R+ +VGPNGAGKST+LKLL L P++G++ ++ LRI +
Sbjct: 531 HP-ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQH 589
Query: 586 XXXXXXXXXXXXXYMMKEFP 645
++ K FP
Sbjct: 590 HVDTLDLNLNALSFLAKTFP 609
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 454 RLALVGPNGAGKSTLLKLL 510
R L G NG GKSTLL+ L
Sbjct: 210 RYGLTGRNGIGKSTLLRAL 228
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 130 bits (314), Expect = 2e-31
Identities = 68/181 (37%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Frame = +1
Query: 46 NGVCTNIVHMSKRRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHG 225
N VCT+I+H+ ++L YY+GNY+ F++ R E K+ ++ +A ++N + G
Sbjct: 483 NEVCTDIIHLYHQKLDYYSGNYDTFLKVRAERDVQLAKKARQQEKDMAKLQNKLNMTGSE 542
Query: 226 SAKLAR---QAQSKEKTLAKMVAQGLTEKVVDDKILNFYFPSCGK-VPPPVIMVQNVSFR 393
K A+ +A +K+ K + L E+++ +K L F CG +P P I Q+VSF
Sbjct: 543 QQKKAKAKVKAMNKKLEKDKQSGKVLDEEIIQEKQLVIRFEDCGGGIPSPAIKFQDVSFN 602
Query: 394 YTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLRIGR 573
Y GP I+ L FG+DL +R+ALVGPNGAGK+TL+KL+ + PSTG + ++ LR+
Sbjct: 603 YP-GGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSVVRHHGLRLAL 661
Query: 574 Y 576
+
Sbjct: 662 F 662
Score = 34.3 bits (75), Expect = 0.015
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 406 GPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPS 531
G + K+ E + R L+ PNG+GKSTLL + L+P+
Sbjct: 287 GKLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIPT 328
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 66.9 bits (156), Expect = 2e-12
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = +1
Query: 364 VIMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
+I VQ++SF+Y + ++ F + L +R+A++GPNGAGKSTL+K+L G+L+P+ G I
Sbjct: 672 IIKVQHMSFQYPGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEI 731
Query: 544 RKNSHLRI 567
++ + RI
Sbjct: 732 YQHENCRI 739
Score = 29.1 bits (62), Expect = 0.57
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 454 RLALVGPNGAGKSTLLKLL 510
R L GPNG+GKSTL++ +
Sbjct: 462 RYGLCGPNGSGKSTLMRAI 480
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 66.9 bits (156), Expect = 2e-12
Identities = 27/69 (39%), Positives = 48/69 (69%)
Frame = +1
Query: 364 VIMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
++ + N S+ Y ++ N+ G+ L +R+A++GPNGAGKSTL+K+L G+++P G +
Sbjct: 691 ILKMTNASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEGKV 750
Query: 544 RKNSHLRIG 570
K+ +LR+G
Sbjct: 751 FKHPNLRVG 759
Score = 29.9 bits (64), Expect = 0.33
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +1
Query: 52 VCTNIVHMS-----KRRLKYYTGNYEAFVRTRME 138
VCT+I+H ++L YY GN AFV+ + E
Sbjct: 626 VCTDIIHYEGVKNQAKKLGYYQGNLSAFVKVKPE 659
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 379 NVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGD 519
N F G + + + R +VG NG GKSTLL+ + GD
Sbjct: 447 NTDFSLAYGGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI-GD 492
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 46.8 bits (106), Expect = 3e-06
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 364 VIMVQNVSFRY-TDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGM 540
++ +NV F Y T I+ NL F I T +A+V P+G GKST+ +LL PS+G
Sbjct: 481 ILSFRNVGFAYPTRPSASIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGK 540
Query: 541 I 543
I
Sbjct: 541 I 541
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 45.2 bits (102), Expect = 8e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Frame = +1
Query: 367 IMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
+ V N+S+ ++ P ++ + +R LVG NGAGKSTLLKLL G + G I
Sbjct: 3 VTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHI 61
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 39.9 bits (89), Expect = 3e-04
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 367 IMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLY 513
I NV F Y + P I F I ++A VG +G GKST+L+LL+
Sbjct: 443 IQFDNVHFSYNPNRP-ILNGCSFNIPAGAKVAFVGASGCGKSTILRLLF 490
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +1
Query: 367 IMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTL 498
I+ +VS Y+ +GP I K++ I+ ++A+VG G+GKSTL
Sbjct: 1212 IVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTL 1255
Score = 28.7 bits (61), Expect = 0.76
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 463 LVGPNGAGKSTLLKLLYGDLVPSTG 537
++GP G+GKS+L+ L G+L + G
Sbjct: 646 VIGPTGSGKSSLISALLGELSLNKG 670
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 367 IMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIR 546
I + S RY ++ P + ++ I ++ +VG GAGKSTL L+ + P++G I+
Sbjct: 1224 IKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQ 1283
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 334 FPSCGKVPPPVIMVQNVSFRYTDS--GPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKL 507
FP GK+ VSF Y DS N+ I+ ++A+VG +G+GKSTL++L
Sbjct: 1093 FPLVGKIE-----FDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLVEL 1147
Query: 508 L 510
L
Sbjct: 1148 L 1148
Score = 33.5 bits (73), Expect = 0.027
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 379 NVSFRYTDSGPWIYK--NLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
NVSF Y ++ N+ I + ++GP+G+GKST + LL P+ G I
Sbjct: 437 NVSFAYPSRDENLFSLINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNI 493
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 35.9 bits (79), Expect = 0.005
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 199 NYIARFGHGSAKLARQAQSKEKTLAKM--VAQGLTEKVVDDKILNFYFPSCGKVPPPVIM 372
+Y + G + + +Q+ E + + + + K +I+ P C +
Sbjct: 1168 SYAIQITQGLSFIVQQSVDAENNTVSVERILEYINVKSEAPEIIPENRPPCEWPTDGAVS 1227
Query: 373 VQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
+ S +Y + + N+ I ++ +VG GAGKSTL L+ + P+ G I
Sbjct: 1228 FNHYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKI 1284
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 457 LALVGPNGAGKSTLLKLLYGDLVPSTG 537
L LVG NG GKST LK+L G + P+ G
Sbjct: 106 LGLVGTNGIGKSTALKILSGKMKPNLG 132
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.3 bits (75), Expect = 0.015
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 385 SFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYG 516
S+ +T S + + L G+ + L LVG G GK+T ++LL G
Sbjct: 446 SYAFTSSSLGLLEQLAAGVQTNEPLLLVGETGTGKTTTIQLLAG 489
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 34.3 bits (75), Expect = 0.015
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 349 KVPPPVIMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLL 510
KV ++ +VSF Y P + ++ F +ALVG +G GKST++++L
Sbjct: 578 KVTQGKVIFSHVSFAYDPRKP-VLSDINFVAQPGKVIALVGESGGGKSTIMRIL 630
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 33.1 bits (72), Expect = 0.035
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 415 IYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPS 531
++KN+ F + A++G G+G++T L+ + G PS
Sbjct: 19 LFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPS 57
Score = 32.3 bits (70), Expect = 0.062
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 361 PVIMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGD 519
P+I +++++ Y G + ++ + I R AL G NG+GK+TLL + GD
Sbjct: 263 PLISMEHLNCVYW--GRKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVGD 313
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 421 KNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDL 522
KNL F I + +VG G+GKSTL L G+L
Sbjct: 598 KNLNFTIPRNQFTLVVGSTGSGKSTLAMALLGEL 631
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 367 IMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTL-LKLLYGDLVPS 531
+ ++N++ Y+ + +++ I ++A+VG G+GKST+ L LL ++ S
Sbjct: 1180 VSIKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMS 1235
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 463 LVGPNGAGKSTLLKLLY-GDLVPSTGMI 543
+VGP+G+GKSTL+ L+ L+ S G +
Sbjct: 37 VVGPSGSGKSTLINTLFSAHLMDSKGRL 64
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 457 LALVGPNGAGKSTLLKLLYGD 519
+ + GP+G GKSTLLK L D
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKD 41
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 445 LDTRLALV-GPNGAGKSTLLKLLYGDL 522
L++RL L+ GP+G GKST +++L +L
Sbjct: 103 LESRLLLICGPSGCGKSTAVQVLAKEL 129
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 328 FYFPSCGKVPPPVIMVQNVSFRYTDSGPWIYKNLEF----GIDLDTRLALVGPNGAGKST 495
F P ++ V++ NV TD +N ++ GI L GP G+GK++
Sbjct: 198 FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTS 257
Query: 496 LLKLLYGDL 522
L L G+L
Sbjct: 258 FLYALAGEL 266
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = -2
Query: 471 SNQSKSCIKVNAKFQIL 421
+NQSKS +K+N +++++
Sbjct: 204 NNQSKSSLKINLEYKVI 220
Score = 21.8 bits (44), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 336 KVEIEYLVINHLL 298
K+ +EY VI HLL
Sbjct: 212 KINLEYKVIKHLL 224
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1254
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 412 WIYKNLEFGIDLDTRLALVGPNGAGKSTLLK 504
++ ++ G + + L GPN AGKSTLL+
Sbjct: 1005 FVPNDVVLGGESPNMIVLTGPNMAGKSTLLR 1035
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 464 KASLVSRSMPNSKFLYIHGPESVYLNDT 381
K V + NS FLY G ES+ NDT
Sbjct: 584 KLKFVQKEGSNSLFLYTAGAESINENDT 611
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 457 LALVGPNGAGKSTLLKLL 510
+A++GP G GKSTL+K L
Sbjct: 77 VAVMGPPGTGKSTLIKSL 94
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 460 ALVGPNGAGKSTLL 501
+++GPNGAGKS L+
Sbjct: 29 SIIGPNGAGKSNLM 42
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 457 LALVGPNGAGKSTLLKLL 510
+A++GP+ AGKS+L+ LL
Sbjct: 242 VAILGPSNAGKSSLINLL 259
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 460 ALVGPNGAGKSTLLKLL 510
AL+G +GAGK+TLL +L
Sbjct: 915 ALMGESGAGKTTLLNVL 931
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -1
Query: 244 DAPIWRNHDRISLCSFSYVQSGLVPSC 164
+A +++ + S+C+FS +S L+P+C
Sbjct: 629 EAQVYKGMLKCSVCNFSNWKSKLIPNC 655
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 451 TRLALVGPNGAGKSTLLKLLY 513
T+L L+GP +GK TLL L+
Sbjct: 281 TKLLLLGPPKSGKKTLLSRLF 301
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 25.8 bits (54), Expect = 5.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 367 IMVQNVSFRY-TDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMI 543
I ++N+ F Y T + N ALVG +G+GKST++ L+ P G +
Sbjct: 420 IELKNIRFVYPTRPEVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQV 479
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.8 bits (54), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 463 LVGPNGAGKSTLLKLL 510
++GPNG GKST++ +
Sbjct: 38 IIGPNGTGKSTIVSAI 53
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 386 HSDTLILGRGYTRIWNLALTLIQDLLWLDPMEQASQRYSS 505
HSDTL+ + + ++ LW + +E+ASQ Y S
Sbjct: 1800 HSDTLVRQALLVSQELIRVAILWHELWYEGLEEASQAYFS 1839
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 448 DTRLALVGPNGAGKSTLL-KLLYGDLVPSTGMIRKN 552
+ R+ +VG + AGK+T+L KL G++V + I N
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFN 52
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 460 ALVGPNGAGKSTLLKLL 510
++VGPNG+GKS ++ L
Sbjct: 152 SIVGPNGSGKSNVIDAL 168
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 454 RLALVGPNGAGKST 495
RL LVGP GAGK T
Sbjct: 5 RLILVGPPGAGKGT 18
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/89 (20%), Positives = 39/89 (43%)
Frame = +1
Query: 4 RNRHEGSRIRKTSWNGVCTNIVHMSKRRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQ 183
RNR G RI T + + + ++ ++ + + ++L++ KQYN+ +Q
Sbjct: 678 RNRGYGFRIVSTQRSSGISKVTPWNRPPRIGFSSSTS--IEAEKKILDDLKKQYNFASNQ 735
Query: 184 IAHMKNYIARFGHGSAKLARQAQSKEKTL 270
+ K A+F L + + +K +
Sbjct: 736 LNEAKIEQAKFKRDEQLLVEKIEGIKKRI 764
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 138 IARESDETVQLGTRPDCT 191
IA SDE ++L PDC+
Sbjct: 46 IAHNSDEAIELTNHPDCS 63
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 412 WIYKNLE-FGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHL 561
W YK++E FG + + +A+ G + S L +L+Y P I K + L
Sbjct: 176 WTYKHIESFGGNKE-NIAVGGISAGSYSALFQLIYETYHPEANQIIKRALL 225
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 383 YHSDTLILGRGYTRI---WNLALTLIQDLLWLDP 475
Y + L+LG GYT++ W L + L + + L P
Sbjct: 394 YLAPELLLGHGYTKVVDWWTLGVLLYEMITGLPP 427
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 430 EFGIDLDTRLALVGPNGAGKSTLLK 504
+ GID + L GP G GK+ L+K
Sbjct: 162 QIGIDPPRGVLLYGPPGTGKTMLVK 186
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 46 NGVCTNIVHMSKRRLKYYTGNYEAFVRTRMELLENQMKQYN 168
N + N++ ++ R+K+ G + FVR L ++ + N
Sbjct: 512 NDLFRNVIENNRNRVKFVHGGLKIFVRQDFGSLSREIAEKN 552
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 457 LALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNS 555
L + GP G+GKSTL L +L + K S
Sbjct: 28 LGISGPQGSGKSTLASALDTELTRKNESVVKFS 60
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.0 bits (52), Expect = 9.3
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = -1
Query: 259 LWTVLDAPIWRNHDRISLCSFSYVQSGLVPSCTVSSDSLAIPCAS*RRLHSYQCNTSNGA 80
LWT A + ++ S CS PSC S C+S + S G
Sbjct: 209 LWTE-HAELKSVNEGSSCCSKKDSSPSEKPSCC--SQEKKSCCSS--KKPSCCSQEKKGC 263
Query: 79 YSYERYSCIHRSKKSCECEIPRADSC 2
S E+ SC + KKSC C + C
Sbjct: 264 CSTEKTSCCSQEKKSC-CTSEKPSCC 288
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 442 DLDTRLALVGPNGAGKSTLLK 504
D ++ L GP+G GKS LL+
Sbjct: 7 DYLVKIVLAGPSGTGKSCLLQ 27
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = -1
Query: 220 DRISLCSFSYVQSGLVPSCTVSSDSLAIPCAS*RRLHSYQCNTSNGAYSY 71
D ++C F+Y Q+G + T+SS++ IP +S R +++ + + Y
Sbjct: 553 DGYNVCIFAYGQTGSGKTHTMSSNTGMIP-SSVRMIYNRSTSLKERGWEY 601
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,851,221
Number of Sequences: 5004
Number of extensions: 60639
Number of successful extensions: 295
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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