Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0181
(322 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 59 6e-10
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 45 1e-05
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 42 9e-05
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 33 0.056
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 33 0.056
At1g61370.1 68414.m06916 S-locus lectin protein kinase family pr... 27 2.8
At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT) id... 26 6.5
At1g61430.1 68414.m06922 S-locus protein kinase, putative simila... 25 8.6
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 59.3 bits (137), Expect = 6e-10
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +2
Query: 2 VKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQ 181
V L LP++ LL LY +KQA G D +RPG+ +K +AK+DAW + G S E+A
Sbjct: 14 VNTLTELPSNEDLLILYGLYKQAKFGPVD-TSRPGMFSMKERAKWDAWKAVEGKSSEEAM 72
Query: 182 KAYIEIVEGLI 214
YI V+ L+
Sbjct: 73 NDYITKVKQLL 83
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 20 LPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEI 199
+P+D Q LY +K AT G A +P L + +AK+ AW KL E+A + YIEI
Sbjct: 127 VPSDVQQ-QLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEI 184
Query: 200 VEGL 211
V L
Sbjct: 185 VTQL 188
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 41.9 bits (94), Expect = 9e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 41 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 211
L LY +K AT G A +P L + +AK+ AW KL E+A + YI++V L
Sbjct: 123 LQLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQL 178
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 32.7 bits (71), Expect = 0.056
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 11 LKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAY 190
+ P D LL LYA ++QATVG + +P ++K+ +W L +A + +
Sbjct: 36 ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRLF 93
Query: 191 IEIVE 205
++I+E
Sbjct: 94 VKILE 98
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 32.7 bits (71), Expect = 0.056
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 11 LKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAY 190
+ P D LL LYA ++QATVG + +P ++K+ +W L +A + +
Sbjct: 36 ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRLF 93
Query: 191 IEIVE 205
++I+E
Sbjct: 94 VKILE 98
>At1g61370.1 68414.m06916 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 814
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 180 WASSFEVPASLCQASNLALPFKSRRPGLLAGSASPTVACLK 58
W + E P S C N PF GL S P CLK
Sbjct: 275 WVTDLEAPVSSCDVYNTCGPF-----GLCIRSNPPKCECLK 310
>At5g55500.1 68418.m06912 beta-(1,2)-xylosyltransferase (XYLT)
identical to SP|Q9LDH0
Length = 534
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 134 FDAWHKLAGTSKEDAQKAYIEIVEGLIASIGLKE 235
FD+ H T K I +V GL+A + +K+
Sbjct: 418 FDSLHHWVATGSTGLTKCGINLVNGLLAHMSMKD 451
>At1g61430.1 68414.m06922 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 806
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 180 WASSFEVPASLCQASNLALPFKSRRPGLLAGSASPTVACLK 58
W S++E PA+ C + PF GL S P C K
Sbjct: 270 WESTYEGPANSCDIYGVCGPF-----GLCVVSIPPKCKCFK 305
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,976,996
Number of Sequences: 28952
Number of extensions: 125483
Number of successful extensions: 299
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 350523880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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