Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0177
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48009-10|CAA88082.1|  331|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z77665-3|CAB01218.1|  103|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z48009-10|CAA88082.1|  331|Caenorhabditis elegans Hypothetical
           protein AH6.14 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 511 NKALFES*KPQILLENIFSKNLIQ-FYIDDSITSLFSRRGRLRFVSHIVITYTN 353
           NK+LF+     ++LE++F  NL Q FY  ++IT L+          +I+ T +N
Sbjct: 47  NKSLFQWSTKMLILESLFFANLYQIFYGIEAITILYKHHFMTSDFCNIMQTESN 100


>Z77665-3|CAB01218.1|  103|Caenorhabditis elegans Hypothetical
           protein K02E11.4 protein.
          Length = 103

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 589 LPLSLLLTATMHRQRSPSAVTSRNRNNKAL 500
           LP+S      +++++ PS VT+ N+N KAL
Sbjct: 45  LPVSANYRRLVNKKKVPSGVTTYNKNKKAL 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,087,869
Number of Sequences: 27780
Number of extensions: 246834
Number of successful extensions: 553
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)