Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0175
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g27430.2 68416.m03429 20S proteasome beta subunit B (PBB1) id... 205 2e-53
At3g27430.1 68416.m03428 20S proteasome beta subunit B (PBB1) id... 205 2e-53
At5g40580.2 68418.m04925 20S proteasome beta subunit B (PBB2) (P... 204 3e-53
At5g40580.1 68418.m04924 20S proteasome beta subunit B (PBB2) (P... 204 3e-53
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 77 7e-15
At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative... 68 4e-12
At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1) (... 65 4e-11
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 50 9e-07
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 48 5e-06
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 48 5e-06
At3g60820.1 68416.m06804 20S proteasome beta subunit F1 (PBF1) 40 0.001
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 36 0.027
At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1) (... 35 0.036
At1g79680.1 68414.m09293 wall-associated kinase, putative simila... 29 2.4
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 28 4.1
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 28 5.4
At5g23575.1 68418.m02766 transmembrane protein, putative similar... 28 5.4
At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein con... 28 5.4
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 28 5.4
At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase fa... 27 7.2
At4g33300.1 68417.m04737 disease resistance protein (CC-NBS-LRR ... 27 9.5
At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase fa... 27 9.5
>At3g27430.2 68416.m03429 20S proteasome beta subunit B (PBB1)
identical to 20S proteasome beta subunit PBB1 (PBB1)
GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2),
677-692 (1998)); contains Pfam profile: PF00227
proteasome A-type and B-type;
Length = 273
Score = 205 bits (500), Expect = 2e-53
Identities = 98/153 (64%), Positives = 114/153 (74%)
Frame = +1
Query: 139 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 318
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 319 ENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAAT 498
E +V+DKNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA T
Sbjct: 61 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALT 120
Query: 499 LLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIY 597
LLK+ LF YQGH+ AALVLGGVD TGPH++ IY
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
>At3g27430.1 68416.m03428 20S proteasome beta subunit B (PBB1)
identical to 20S proteasome beta subunit PBB1 (PBB1)
GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2),
677-692 (1998)); contains Pfam profile: PF00227
proteasome A-type and B-type;
Length = 267
Score = 205 bits (500), Expect = 2e-53
Identities = 98/153 (64%), Positives = 114/153 (74%)
Frame = +1
Query: 139 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 318
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 319 ENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAAT 498
E +V+DKNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA T
Sbjct: 61 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALT 120
Query: 499 LLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIY 597
LLK+ LF YQGH+ AALVLGGVD TGPH++ IY
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
>At5g40580.2 68418.m04925 20S proteasome beta subunit B (PBB2)
(PRCFC) identical to 20S proteasome beta subunit PBB2
[Arabidopsis thaliana] GI:3421104, cDNA proteasome
subunit prcfc GI:2511575
Length = 274
Score = 204 bits (499), Expect = 3e-53
Identities = 98/153 (64%), Positives = 114/153 (74%)
Frame = +1
Query: 139 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 318
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 319 ENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAAT 498
E +V+DKNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA T
Sbjct: 61 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALT 120
Query: 499 LLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIY 597
LLK+ LF YQGH+ AALVLGGVD TGPH++ IY
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
>At5g40580.1 68418.m04924 20S proteasome beta subunit B (PBB2)
(PRCFC) identical to 20S proteasome beta subunit PBB2
[Arabidopsis thaliana] GI:3421104, cDNA proteasome
subunit prcfc GI:2511575
Length = 274
Score = 204 bits (499), Expect = 3e-53
Identities = 98/153 (64%), Positives = 114/153 (74%)
Frame = +1
Query: 139 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 318
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 319 ENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAAT 498
E +V+DKNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA T
Sbjct: 61 EGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALT 120
Query: 499 LLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIY 597
LLK+ LF YQGH+ AALVLGGVD TGPH++ IY
Sbjct: 121 LLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 77.4 bits (182), Expect = 7e-15
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 253 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSV 432
GTTI+G+ Y GV+LGAD+R + V+++ KI L N+Y C +G+AAD+++ + V
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 433 ASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-TGPHIYCI 594
L + G+ V+ +A L++ + + + + L++GG D+ G IY I
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGI 126
>At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative
very strong similarity to SP|O23717 Proteasome subunit
beta type 5 precursor (EC 3.4.25.1) (20S proteasome
subunit E) (Proteasome epsilon chain) {Arabidopsis
thaliana}
Length = 273
Score = 68.1 bits (159), Expect = 4e-12
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +1
Query: 127 SNHEMASAL--VPEIPVPGFS-FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVIL 297
SN EM P +P + F+ FQ+ A K PA GTT + I+ +GV++
Sbjct: 19 SNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVK--PAK-----GTTTLAFIFKEGVMV 71
Query: 298 GADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTV 477
AD+RA+ +S ++ +KI + M AG AAD + +++ + L L R +
Sbjct: 72 AADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRI 131
Query: 478 PVETAATLLKRMLFRYQG-HIGAALVLGGVDRTGPHIYCI 594
V A+ LL ML+ Y+G + ++ G D TGP +Y +
Sbjct: 132 SVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYV 171
>At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1)
(PRCE) identical to GB:O23717; identical to cDNA
proteasome subunit prce GI:2511595
Length = 274
Score = 64.9 bits (151), Expect = 4e-11
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +1
Query: 169 VPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNC 348
VP F + +K K K GTT + I+ GV++ AD+RA+ +S ++
Sbjct: 30 VPSFDLPRTKEFDGFQKKAKDMLKHAK-GTTTLAFIFKGGVMVAADSRASMGGYISSQSV 88
Query: 349 QKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQ 528
+KI + M AG AAD + +++ + L L R + V A+ LL ML+ Y+
Sbjct: 89 KKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYR 148
Query: 529 G-HIGAALVLGGVDRTGPHIYCI 594
G + ++ G D TGP +Y +
Sbjct: 149 GMGLSVGTMIAGWDETGPGLYYV 171
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 50.4 bits (115), Expect = 9e-07
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A KA T+VGI DG+++G + ++ N ++IH + + AG AAD
Sbjct: 27 AAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSN-RRIHSVHRHAGMAVAGLAADG 85
Query: 412 EMTTQSVASQLELQRLHTGRTVPVE-----TAATLLKRMLFRYQGHIGAALVLGGVDRTG 576
S+ G VPV+ A+ + L+ + G ++LGG DR G
Sbjct: 86 RQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDG 145
Query: 577 PHIYCI 594
P +Y I
Sbjct: 146 PQLYMI 151
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A K G+T +G+ +GV+L + R T + ++ + +KI + ++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSGLIADA 85
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH-------IGAALVLGGVD 567
+ + + R G + VE+ L + R+ +G G +L++ G D
Sbjct: 86 RTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHD 145
Query: 568 RTGPHIY 588
GP +Y
Sbjct: 146 ENGPSLY 152
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A K G+T +G+ +GV+L + R T + ++ + +KI + ++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSGLIADA 85
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH-------IGAALVLGGVD 567
+ + + R G + VE+ L + R+ +G G +L++ G D
Sbjct: 86 RTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHD 145
Query: 568 RTGPHIY 588
GP +Y
Sbjct: 146 ENGPSLY 152
>At3g60820.1 68416.m06804 20S proteasome beta subunit F1 (PBF1)
Length = 223
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +1
Query: 253 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSV 432
G T V I +D ++ ADTR + + ++ KIH LA +G AD + + +
Sbjct: 15 GGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVL 74
Query: 433 ASQ-LELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTG 576
S+ L Q H + A L + F+ A VLGG+D G
Sbjct: 75 KSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEG 123
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 35.5 bits (78), Expect = 0.027
Identities = 18/85 (21%), Positives = 39/85 (45%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A + +GI+ DGV+L + + T + + + +K++ + ++ C AG +D
Sbjct: 24 AMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDA 83
Query: 412 EMTTQSVASQLELQRLHTGRTVPVE 486
+ + Q + +PVE
Sbjct: 84 NILINTARVQAQRYTFMYQEPMPVE 108
>At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1)
(PRCH) identical to 20S proteasome beta subunit (PBG1)
GI:3421123 [Arabidopsis thaliana]; identical to cDNA
proteasome subunit prch GI:2511597
Length = 246
Score = 35.1 bits (77), Expect = 0.036
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = +1
Query: 250 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD-TEMTTQ 426
TGT+IV I Y DGV++ +D + + + KN +++ + + +G +D E+
Sbjct: 30 TGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRY 89
Query: 427 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGA---ALVLGGV 564
L G ++ + L R+++ + LVLGGV
Sbjct: 90 LDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGV 138
>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
to wall-associated kinase 2 GI:4826399 from [Arabidopsis
thaliana]
Length = 769
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 375 VGC*VVDFLAVFVRDNCIFSGSCVSS*NNAVCVYYTNNCSTGLGG 241
+GC +D + RDN + C+ N+ Y T +C++G G
Sbjct: 269 LGCKSIDEYTILRRDNREYGIGCLCDYNSTTTGYATCSCASGFEG 313
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +1
Query: 310 RATENTVVSDKNCQKIHYLASNMYCCGAGT----AADTEMTTQSVASQLELQRLHTGRTV 477
+AT ++ + + ++ + + + YC G AAD S+ + ++R R
Sbjct: 210 KATCSSAMKGSSSKRSNDVCTYRYCSLHGRRHSHAADNNAGVPSLKRFVSMRRKFMNRQK 269
Query: 478 PVETAATLLKRMLFRYQGHIGAALV 552
V LLKR L R +G +G +V
Sbjct: 270 SVNRRLVLLKRTLSRKRGPLGGRVV 294
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKI--HYLASNMYCCGAGTAA 405
A +A K G+ +G+ V+L +A + K+ H + G
Sbjct: 25 AMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQRKIFKVDDHIGVAIAGLTADGRVL 84
Query: 406 DTEMTTQSVASQLELQR-LHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPH 582
M ++S+ + L GR V V A ++ G L++GG+D +G H
Sbjct: 85 SRYMRSESINHSFTYESPLPVGRLV-VHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAH 143
Query: 583 IY 588
+Y
Sbjct: 144 LY 145
>At5g23575.1 68418.m02766 transmembrane protein, putative similar to
cleft lip and palate transmembrane protein 1 [Homo
sapiens] GI:4039014; contains Pfam profile PF05602:
Cleft lip and palate transmembrane protein 1 (CLPTM1)
Length = 593
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = -1
Query: 433 QQIVLSFQCQL---LFLLHNNTCWML--SSG 356
+ +VL+F CQ L+LL N+T WM+ SSG
Sbjct: 368 KSVVLNFICQFVIFLYLLDNDTSWMILASSG 398
>At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein
contains Pfam profile PF05602: Cleft lip and palate
transmembrane protein 1 (CLPTM1)
Length = 590
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = -1
Query: 433 QQIVLSFQCQL---LFLLHNNTCWML--SSG 356
+ +VL+F CQ L+LL N+T WM+ SSG
Sbjct: 366 KSVVLNFICQFIIFLYLLDNDTSWMILASSG 396
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKI--HYLASNMYCCGAGTAA 405
A +A K G+ +G+ V+L +A + K+ H + G
Sbjct: 25 AMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQRKIFKVDDHIGVAIAGLTADGRVL 84
Query: 406 DTEMTTQSVASQLELQR-LHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPH 582
M ++S+ + L GR V V A ++ G L++GG+D +G H
Sbjct: 85 SRYMRSESINHSFTYESPLPVGRLV-VHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAH 143
Query: 583 IY 588
+Y
Sbjct: 144 LY 145
>At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P95649 CbbY protein
{Rhodobacter sphaeroides}; contains InterPro accession
IPR005834: Haloacid dehalogenase-like hydrolase
Length = 1055
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 447 VAALTYWTYCTCRNCCH 497
V L +WTYC C NC H
Sbjct: 421 VVILDFWTYC-CINCMH 436
>At4g33300.1 68417.m04737 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 816
Score = 27.1 bits (57), Expect = 9.5
Identities = 26/100 (26%), Positives = 43/100 (43%)
Frame = +1
Query: 274 IYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQ 453
I AD L ADT + V D + ++ +M G G + E ++ A ++E
Sbjct: 119 ILADVHHLRADTSVRLDRV--DMSLDRVIQQVGSMKIGGGGLIS--EAMKRAEAMEIETN 174
Query: 454 RLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRT 573
V +E +K+M+F QG + +GGV +T
Sbjct: 175 DDSEKFGVGLELGKVKVKKMMFESQGGVFGISGMGGVGKT 214
>At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|O43520], Mus musculus [SP|P70704]; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1218
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 136 EMASALVPEIPVPGFSFENFQ 198
E+ S++ P IP+ GF FE+ +
Sbjct: 487 EVESSITPRIPIKGFGFEDIR 507
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,304
Number of Sequences: 28952
Number of extensions: 237954
Number of successful extensions: 649
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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