Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0174
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8108| Best HMM Match : GST_N (HMM E-Value=3.9e-14) 144 7e-35
SB_3922| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26) 72 4e-13
SB_11755| Best HMM Match : GST_C (HMM E-Value=2.7e-05) 33 0.15
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 29 2.5
SB_13167| Best HMM Match : APH (HMM E-Value=1e-04) 29 3.3
SB_31702| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-05) 29 4.4
SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13) 29 4.4
SB_34239| Best HMM Match : FAD_binding_7 (HMM E-Value=2.4) 28 5.8
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 28 5.8
SB_3368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_8108| Best HMM Match : GST_N (HMM E-Value=3.9e-14)
Length = 238
Score = 144 bits (348), Expect = 7e-35
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Frame = +3
Query: 78 HLRKGDPLPPFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEW-LTTKSA 254
HL GDP PP KLR+Y+MR+CPYA+R L L AK +DYE +NI+L +KP+W L +
Sbjct: 5 HLSNGDPRPPPGDKLRLYSMRFCPYAERPRLVLAAKGVDYECININLKNKPDWYLAEPNP 64
Query: 255 FAKVPAIEIAEDVTIYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVEASAPIQSLFI 434
VP IE+ + + ESL+ EYLDE++P+ P+ P D +K +++++ + S F
Sbjct: 65 RGLVPMIEMPDGRLLPESLLCCEYLDELFPQNPMYPSDAFEKNRQRLLIDRFGKVTSSFY 124
Query: 435 KIL--KFSDTVNEEHVAAYHKALDFIQEQLKNRGTVFLDGSEPGYADYMIWPWFER 596
++L + + +K L + +LKN+ F G +PG AD+M+WP+FER
Sbjct: 125 QMLMRDMDEDALKGQTETLNKELSLYENELKNK--TFFAGEKPGMADFMLWPFFER 178
>SB_3922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 97.5 bits (232), Expect = 8e-21
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Frame = +3
Query: 57 NINFNTKHLRKGD--PLPPFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKP 230
+I H+ KG P P N KLR+Y+MR+CP+A+R L L AK +DYE VN++L KP
Sbjct: 8 SITMPVTHISKGSSRPAKPQN-KLRLYSMRFCPFAERPRLVLAAKGLDYECVNVNLKSKP 66
Query: 231 EWLTT-KSAFAKVPAIEIAEDVTIYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVE 404
EW T KVP +E + I ES++ E+L++ Y K PL P DP K+ K++ +
Sbjct: 67 EWFQTHPDCEGKVPTLETMDGKLIPESVIICEFLEDYYRKIPLYPCDPYAKSRQKLLAQ 125
>SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26)
Length = 492
Score = 72.1 bits (169), Expect = 4e-13
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Frame = +3
Query: 123 RVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDK-PEWLTTKSAFAKVPAIEIAEDVTI 299
++YN +CP+AQR +A+ AK+ ++E + + +K PEWL + VP I + +
Sbjct: 263 KLYNAWFCPFAQRAWIAMLAKKAEFEYIEQNPYNKTPEWLAI-NPNGLVPVI-VHNGNAV 320
Query: 300 YESLVTVEYLDEVYPKR-PLLPQDPLKKALDKIIVE--ASAPIQSLFIKILKFSDTVNEE 470
YES + +E++DE + +LP+DP K+A ++ + + + + +LK EE
Sbjct: 321 YESSICIEFIDEAFSTPVTILPKDPYKRAHGRMWGDFVSKKLVPHFYTMLLKQDKEDQEE 380
Query: 471 HVAAYHKALDFIQEQLKNRGTVFLDGSEPGYADYMIWPWFERLRAXAH 614
Y + L ++ G F G GY D M P+ R+ H
Sbjct: 381 AKTKYLEGLRTFTNEMDPEGP-FFQGKHLGYVDIMWAPFAARMHILEH 427
>SB_11755| Best HMM Match : GST_C (HMM E-Value=2.7e-05)
Length = 142
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +3
Query: 318 VEYLDEVYPKRPLLPQ-DPLKKAL----DKIIVEASAPIQSLFIKILKF 449
+EYLDE P PLLP+ DP K+AL I PIQ+L K+L++
Sbjct: 1 MEYLDETRPDPPLLPRGDPHKRALVRQISMTIASGIQPIQNL--KVLQY 47
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 111 NGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDK----PEWLTTKSAFAKVPAIE 278
N + +++ +CP+ ++ + + Y + +DL+D E L KS VP +
Sbjct: 576 NNAVMIFSKSFCPFCKKVKAIFESINVQYTAMELDLVDNGPAIQEALLEKSGQKTVPNVY 635
Query: 279 I 281
I
Sbjct: 636 I 636
>SB_13167| Best HMM Match : APH (HMM E-Value=1e-04)
Length = 374
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 432 IKILKFSDTVNEEHVAAYHKALDFIQEQ 515
+KIL SD+ NEE + A + A+D+++E+
Sbjct: 60 LKILNSSDSSNEELIYAENAAIDYLRER 87
>SB_31702| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-05)
Length = 364
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 632 KSHSFIMCXCPKPLEPRPYHIISVSRFTS 546
KS+SF + C P+ R +H++S S F +
Sbjct: 44 KSYSFQILTCTSPITCRMFHVVSSSLFVT 72
>SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13)
Length = 360
Score = 28.7 bits (61), Expect = 4.4
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +3
Query: 171 ALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTIYE-SLVTVEYLDEVYPK 347
A NA++ EV+ D ++ EW +K F K+ A+++ ++ Y SLV+ E Y
Sbjct: 154 AENAQKRYEEVITKDKMNAKEWDKSKDKFIKM-ALKLHQNHNDYVLSLVSANCHQEFY-H 211
Query: 348 RPLLPQ--DPLKKALDKIIVEASAPIQSLFIKILKFSDTVNEEHVAAYHKALDFI 506
++P + L++ + I E +Q +IL F+D EE V + K + I
Sbjct: 212 NSVVPTMLEHLQELQESYINEWKEILQ----EILNFTDCCREEFVTSSIKVHESI 262
>SB_34239| Best HMM Match : FAD_binding_7 (HMM E-Value=2.4)
Length = 288
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 498 DFIQEQLKNRGTVFLDGSEPGYADYMIWPWFERLRAXAHDERVRLEPSKYSLL 656
DF ++ G F D EP +++Y +W + A A+ + + Y LL
Sbjct: 183 DFARQTFTLYGCYFPDNQEPAFSNYRLWESLGFVVAFAYASFICINVKLYILL 235
>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
Length = 1002
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 267 PAIEIAEDVTIYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVEASAPIQSLFIKILK 446
P ++ +++ +Y+ LV++ +E +R L ++ +K+ L + I E +AP S+ +
Sbjct: 619 PLVKPPKNLHVYDMLVSLVEAEEKCIQRVRLSEEEVKEILQQRIKEEAAPQLSVSV---- 674
Query: 447 FSDTVNEEHVAAYHKALD-FIQEQLKNRGTVFLDGSEP 557
DT E + + L+ +QE+ + LD P
Sbjct: 675 -YDTERNEKAKLHRQELERKMQEEAMKKHETELDYLAP 711
>SB_3368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 633 QVSLFHHVXMP*ASRTKAISYNQRIQVHF 547
++S + H +P ++RT + Y+Q+I HF
Sbjct: 37 EISQYKHAQVPNSTRTLHLRYSQQISPHF 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,058,044
Number of Sequences: 59808
Number of extensions: 365136
Number of successful extensions: 830
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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