Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0172
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   2.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.4  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 179 IWNLNFLFTF-CQTSIKHSIED*TCSC*HIFVCWYNLCVSWGSDNK 45
           IW L   F+  CQ    +S+ D   +   +   W     ++GSD K
Sbjct: 5   IWWLILYFSIVCQAKAHYSLRDFKANIFQVKYQWKYFDYNFGSDEK 50


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 312 HMP*PDEVQYIFWLHRELIIQY 247
           HMP     Q  ++LH++L+ +Y
Sbjct: 251 HMPKEIRGQLYYFLHKQLMTRY 272


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 312 HMP*PDEVQYIFWLHRELIIQY 247
           HMP     Q  ++LH++L+ +Y
Sbjct: 251 HMPKEIRGQLYYFLHKQLMTRY 272


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 185 AICVPCFTKVYLL**NPTGGRYCIINSLCS 274
           AI    +TKV L+   P  G Y   +++C+
Sbjct: 173 AIPFAIYTKVNLVEYPPESGNYSADSAMCA 202


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -3

Query: 270 HRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQ 166
           H + ++ ++PP          V++   +ALH + Q
Sbjct: 696 HTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQ 730


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,043
Number of Sequences: 438
Number of extensions: 1997
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)