Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0172
(338 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 56 6e-09
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 55 1e-08
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 53 6e-08
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 53 6e-08
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 52 1e-07
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 51 2e-07
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 50 4e-07
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 47 4e-06
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 47 4e-06
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 45 1e-05
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 44 2e-05
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 44 3e-05
At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/PO... 40 3e-04
At2g40450.1 68415.m04992 speckle-type POZ protein-related contai... 39 0.001
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 38 0.002
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 36 0.005
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 31 0.026
At3g05675.2 68416.m00633 expressed protein 30 0.34
At3g05675.1 68416.m00632 expressed protein 30 0.34
At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase, p... 29 0.79
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 29 0.79
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 29 0.79
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 28 1.8
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 27 2.4
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 27 3.2
At4g27570.1 68417.m03960 glycosyltransferase family protein cont... 27 3.2
At2g02550.1 68415.m00194 exonuclease family protein contains sim... 27 4.2
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 26 5.6
At3g02660.1 68416.m00257 tRNA synthetase class I (W and Y) famil... 26 5.6
At2g15780.1 68415.m01809 glycine-rich protein similar to Blue co... 26 5.6
At5g15540.1 68418.m01819 expressed protein low similarity to DNA... 26 7.4
At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1... 26 7.4
At3g48360.1 68416.m05278 speckle-type POZ protein-related conta... 26 7.4
At5g17580.1 68418.m02062 phototropic-responsive NPH3 family prot... 25 9.7
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 25 9.7
At3g07540.1 68416.m00900 formin homology 2 domain-containing pro... 25 9.7
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 25 9.7
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 56.0 bits (129), Expect = 6e-09
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 18 NNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECK-QEIEVPDVEPSA 194
NN MSD+TF++ K AHK L +S +F AMF G E Q +E+P++
Sbjct: 535 NNPTMSDVTFLIDG----KQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEV 590
Query: 195 FLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKAC 311
F ++K+IY I + L A +Y++ L + C
Sbjct: 591 FELMMKFIYSGRINIAKHLAKDLLVAADQYLLEGLKRQC 629
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 55.2 bits (127), Expect = 1e-08
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +3
Query: 18 NNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECK-QEIEVPDVEPSA 194
NN +SD+TF+V G T AH+ L +S F AMF GG E ++IE+P+++
Sbjct: 536 NNATLSDVTFLV--EGRT--FYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEV 591
Query: 195 FLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETSLT 338
F ++++IY + + + L A +Y++ L + C + +T
Sbjct: 592 FELMMRFIYTGSVDITNEISKDLLRAADQYLLEGLKRLCEYTIAQDIT 639
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 52.8 bits (121), Expect = 6e-08
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 78 IPAHKYVLATASSVFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIYCDEIQLEADTV 254
IPAHK VL + S VF AM + E I++ DV A + Y+Y E L+
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 255 LSTLYVAKKYIVPHLAKACVNYLETSLT 338
L +++KY V HL C +L T L+
Sbjct: 140 CDLLVMSEKYQVKHLKSYCERFLVTKLS 167
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 52.8 bits (121), Expect = 6e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 33 SDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFLALLK 212
SD+TF V + AHK VLA S F +MFY LAE ++ + D+EP F ALL
Sbjct: 205 SDVTFDVAG----EKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLH 260
Query: 213 YIYCDEI 233
++Y D +
Sbjct: 261 FMYKDSL 267
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 51.6 bits (118), Expect = 1e-07
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 33 SDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGL-AECKQEIEVPDVEPSAFLALL 209
+D+TF V G T PAHK VLA S+VF A +G L +E I + DV+ F LL
Sbjct: 202 ADVTFEVD--GET--FPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLL 257
Query: 210 KYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNY 320
+IY DE+ D + + L A + HL A Y
Sbjct: 258 HFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRY 294
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 51.2 bits (117), Expect = 2e-07
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +3
Query: 12 MFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPS 191
+ N+ SDITF V + AH+ VLA S VF + F E ++IEV D+EP
Sbjct: 209 LLENEDGSDITFNVSG----EKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVTDMEPK 264
Query: 192 AFLALLKYIYCDEIQLEADTVLST 263
F ALL YIY D + +A++ S+
Sbjct: 265 VFKALLHYIYKDALIEDAESSSSS 288
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 50.0 bits (114), Expect = 4e-07
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +3
Query: 12 MFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQE-IEVPDVEP 188
+ ++++ DI F VG + AHK +LA S VF A F+G + + I + D+EP
Sbjct: 187 LLDSEVGCDIAFQVG----DETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEP 242
Query: 189 SAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNY 320
S F A+L +IY D + + ST + ++ HL A Y
Sbjct: 243 SIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLY 286
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 46.8 bits (106), Expect = 4e-06
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +3
Query: 15 FNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECK----QEIEVPDV 182
F Q+ +D+ +V IP HK VLA S VF M ECK + I +PD+
Sbjct: 18 FKEQMHTDV--LVKPGEEAPPIPTHKAVLAARSKVFRNMLDSD--ECKTSPEESITLPDL 73
Query: 183 EPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETSLT 338
+LL+++Y ++ + S A KY + +L C N+ SL+
Sbjct: 74 SHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRNHFIASLS 125
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 46.8 bits (106), Expect = 4e-06
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +3
Query: 15 FNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECK----QEIEVPDV 182
F Q+ +D+ +V IP HK VLA S VF M ECK + I +PD+
Sbjct: 18 FKEQMHTDV--LVKPGEEAPPIPTHKAVLAARSKVFRNMLDSD--ECKTSPEESITLPDL 73
Query: 183 EPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETSLT 338
+LL+++Y ++ + S A KY + +L C N+ SL+
Sbjct: 74 SHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRNHFIASLS 125
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 45.2 bits (102), Expect = 1e-05
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 12 MFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECK-QEIEVPDVEP 188
M + +DIT I + G I AH+ VLA S VF +MF L E + EI V D+
Sbjct: 157 MLTESIYTDIT-INASDGS---IGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPL 212
Query: 189 SAFLALLKYIYCDEIQLEADTV--LSTLYVAKKYIVPHLAKAC 311
A A L YIY IQ E + L+ L A+KY + L +AC
Sbjct: 213 DACQAFLSYIY-GNIQNEDFLIHRLALLQAAEKYDIADLKEAC 254
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 78 IPAHKYVLATASSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEA-DT 251
+ AHK +L+ +S+VF +MF+ L E + I + D+ + +ALL Y+Y + Q E
Sbjct: 172 LSAHKAILSASSTVFKSMFHHDLMEKESSTIHIDDMSRESCMALLSYLYGNITQEEFWKH 231
Query: 252 VLSTLYVAKKYIVPHLAKAC 311
L+ L A KY + L AC
Sbjct: 232 RLALLGAANKYDITDLKAAC 251
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 33 SDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFLALLK 212
SDITF + K + AHK VLA S F + F+ E+ + D+EP F ALL+
Sbjct: 198 SDITFNIAGE---KFL-AHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQ 253
Query: 213 YIYCDEI 233
++Y D +
Sbjct: 254 FMYKDSL 260
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to Speckle-type POZ protein (SP:O43791) [Homo
sapiens]
Length = 368
Score = 40.3 bits (90), Expect = 3e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 75 IIPAHKYVLATASSVFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIY--CDEIQLEA 245
+I AH V+ AS V M + ++ I + V A ++++Y C E Q
Sbjct: 66 LIYAHSNVIGMASDVIRGMMKQHKRKSHRKSISILGVPHHALRVFIRFLYSSCYEKQDME 125
Query: 246 DTVLSTLYVAKKYIVPHLAKACVNYLETSL 335
D + L ++ Y+VPHL + C + E+SL
Sbjct: 126 DFAIHLLVLSHVYVVPHLKRVCESEFESSL 155
>At2g40450.1 68415.m04992 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain
Length = 209
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Frame = +3
Query: 6 RAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGG--LAECKQ--EIEV 173
+ + N Q +D+ G T I AHK VL S VF + A KQ + +
Sbjct: 15 KKLLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETVTL 74
Query: 174 PDVEPSAFLALLKYIYCDEIQLEADTVL----STLYVAKKYIVPHLAKACVNYLETSL 335
+++ A +++IY + + + ++ S + A KY +PHL C N L +SL
Sbjct: 75 SEMKHEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELISSL 132
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 120 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 296
F AMF GG E ++IE+P+++ F ++++IY + + + L A +Y++
Sbjct: 518 FRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDITNEISKDLLRAADQYLLEG 577
Query: 297 LAKACVNYLETSLT 338
L + C + LT
Sbjct: 578 LKRLCEYTIAQYLT 591
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 36.3 bits (80), Expect = 0.005
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 33 SDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGL-AECKQEIEV-PDVEPSAFLAL 206
+D+TF V G T PAHK VLA S+VF A +G L +E +EV + PS L
Sbjct: 202 ADVTFEVD--GET--FPAHKLVLAARSAVFRAQLFGPLRSENTNSLEVEAESCPSLLSEL 257
Query: 207 LKYI 218
L+Y+
Sbjct: 258 LEYV 261
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 31.5 bits (68), Expect(2) = 0.026
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 84 AHKYVLATASSVFYAMFYGGLAECKQE-IEVPDVEPSAFLAL 206
AHK VLAT S VF A +G L + + I + D+E F L
Sbjct: 216 AHKLVLATRSPVFNAQLFGPLGDRNTKCITIEDMEAPIFKVL 257
Score = 21.4 bits (43), Expect(2) = 0.026
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 204 LLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNY 320
LL +IY DE+ + + + +A + HL A Y
Sbjct: 292 LLHFIYWDELPDMQELIGTDSTLASTLVAQHLLAAADRY 330
>At3g05675.2 68416.m00633 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.34
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 216 IYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLE 326
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At3g05675.1 68416.m00632 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.34
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 216 IYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLE 326
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967);
1-aminocyclopropane-1-carboxylate oxidase homolog -
Arabidopsis thaliana, PIR:S59548
Length = 370
Score = 29.1 bits (62), Expect = 0.79
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 109 QVQSSMLCFMEVWQNVNKKLRFQM*SHLRSLLY*S---IFTVMKSNWRQIL 252
+V+ + F E Q+ K RF H R ++Y S +FT MK++WR +
Sbjct: 111 KVKEGIRAFHE--QDAELKKRFYSRDHTRKMVYYSNLDLFTAMKASWRDTM 159
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 29.1 bits (62), Expect = 0.79
Identities = 27/94 (28%), Positives = 40/94 (42%)
Frame = +3
Query: 30 MSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFLALL 209
+SD F+VG +PAHK +L AS F G I++ V ALL
Sbjct: 210 LSDTVFLVGE--EEMDVPAHKVILQ-ASGNFPLRSSDG-----DVIQLRGVSYPILHALL 261
Query: 210 KYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKAC 311
+YIY Q+ + ++ K+ V L + C
Sbjct: 262 QYIYTGRTQILESELAPLRDLSSKFEVMSLVRQC 295
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 29.1 bits (62), Expect = 0.79
Identities = 27/94 (28%), Positives = 40/94 (42%)
Frame = +3
Query: 30 MSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFLALL 209
+SD F+VG +PAHK +L AS F G I++ V ALL
Sbjct: 210 LSDTVFLVGE--EEMDVPAHKVILQ-ASGNFPLRSSDG-----DVIQLRGVSYPILHALL 261
Query: 210 KYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKAC 311
+YIY Q+ + ++ K+ V L + C
Sbjct: 262 QYIYTGRTQILESELAPLRDLSSKFEVMSLVRQC 295
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 144 LAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTV--LSTLY 269
L+EC+ IE+PD+ + L +L C + + T+ L LY
Sbjct: 765 LSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLY 808
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 27.5 bits (58), Expect = 2.4
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +3
Query: 18 NNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAE-CKQEIEVPD--VEP 188
N + ++ F +G + I + +A+ S+ F+AM YG E EI++ + V
Sbjct: 175 NRSVSKNVVFKIGE----EKIACQRRKIASLSAPFHAMLYGNFTESLLDEIDMSENHVSS 230
Query: 189 SAFLALLKY-IYCDEIQLEADTVLSTLYVAKKYIVPHLAKAC 311
SA + + + I + + +L L A K+ L AC
Sbjct: 231 SAMRVVRDFSVVGVLIGVSKNLLLEVLVFANKFCCERLKDAC 272
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 144 LAECKQEIEVPDVEPSAFLALLKYIYCDEI 233
L+ CK +EVPD+ + L L YC +
Sbjct: 632 LSRCKYLVEVPDLSKATNLEELNLSYCQSL 661
>At4g27570.1 68417.m03960 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 453
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 246 LPPVGFHHSKYTLVKQGTQMALHLEPQFLVYILPNL 139
+PP G+ SK L KQ LEP + + PNL
Sbjct: 154 VPPPGYPSSKVLLRKQDAYTMKKLEPTNTIDVGPNL 189
>At2g02550.1 68415.m00194 exonuclease family protein contains
similarity to exonuclease I [Homo sapiens]
gi|4249655|gb|AAD13754
Length = 200
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 69 TKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFL 200
TKI +H ++ VF Y + E Q + VP+V FL
Sbjct: 126 TKIFQSHIHITPYVIHVFIEYVYNQVIEELQHLNVPEVSNLPFL 169
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 90 KYVLATASSVFYAMFYGGLAECKQ 161
+Y +A+ S F AM YGG E K+
Sbjct: 264 RYKIASLSRPFKAMLYGGFREMKR 287
>At3g02660.1 68416.m00257 tRNA synthetase class I (W and Y) family
protein similar to SP|P00952 Tyrosyl-tRNA synthetase (EC
6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS) {Bacillus
stearothermophilus}; contains Pfam profiles PF00579:
tRNA synthetases class I (W and Y), PF01479: S4 domain
Length = 511
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 171 VPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYV 272
VPDV+ FL L ++ DEI++ D + YV
Sbjct: 346 VPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYV 379
>At2g15780.1 68415.m01809 glycine-rich protein similar to Blue
copper protein precursor (SP:Q41001) {Pisum sativum};
contains a Pfam PF02298: Plastocyanin-like domain
related to blue copper-binding protein; contains a
domain related to blue copper-binding protein
Length = 257
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 279 FWLHRELIIQYLPPVGFHHSKYTL 208
F+L+ L+ +Y PP F HS Y L
Sbjct: 168 FFLNDILVFKYNPPAPFTHSVYLL 191
>At5g15540.1 68418.m01819 expressed protein low similarity to DNA
repair and meiosis protein Rad9 [Coprinus cinereus]
GI:1353390, SP|Q09725 Sister chromatid cohesion protein
mis4 {Schizosaccharomyces pombe}
Length = 1755
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 98 HIFVCWYNLCVSWGSD 51
H F+CW+ LC+ W D
Sbjct: 707 HTFICWFYLCL-WYKD 721
>At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1;
identical to gi:1703477
Length = 1077
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 15 FNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEP 188
F++ +S I F++ A I+ A + + T +A GLAE + + VPD EP
Sbjct: 776 FSSTDLSHINFVMAA----SILRAETFGIPTPE---WAKTRAGLAEAVERVIVPDFEP 826
>At3g48360.1 68416.m05278 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 25.8 bits (54), Expect = 7.4
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 78 IPAHKYVLATASSVFYAMF------YGGLAECKQEIEVPDVEPSAFLALLKYIYCDEI-Q 236
IPAH VLA+AS V + Y G K+ I++ V A +K++Y + +
Sbjct: 46 IPAHSGVLASASPVLMNIMKKPMRRYRGCGS-KRVIKILGVPCDAVSVFIKFLYSSSLTE 104
Query: 237 LEADTV-LSTLYVAKKYIVPHLAKACVNYLETSLT 338
E + + L ++ Y+V L + C + LT
Sbjct: 105 DEMERYGIHLLALSHVYMVTQLKQRCSKGVVQRLT 139
>At5g17580.1 68418.m02062 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 548
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 66 HTKIIPAH--KYVLATASSVFYAMFYGG-LAECKQEIEVPDVEPSAFLALLKYIYCDEIQ 236
+ K +P H K +LA SS ++ + E + + +V+P F + ++ E +
Sbjct: 12 NVKGVPFHLCKEMLAKRSSKVSSLLERNEIDELRLILRDLEVDPETFELVARFCNGSEFK 71
Query: 237 LEADTVLSTLYVA 275
+DT++S L +A
Sbjct: 72 FTSDTIVSVLCIA 84
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like ABC
transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 294 EVQYIFWLHRELIIQYLPPVGFHHSKY 214
E+ YIF E +I P +GF+ S Y
Sbjct: 1281 EIPYIFIQAAEFVIVTYPMIGFYPSAY 1307
>At3g07540.1 68416.m00900 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 841
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 60 PGHTKIIPAHKYVLATASSVFYAMFYGG 143
P T +IPA VLA A+ + A F+ G
Sbjct: 97 PSRTLLIPAISAVLAAATLIALAFFFYG 124
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 39 ITFIVGAPGHTKIIPAHKYVLATASSVFYAM 131
+ ++ A T IPAHK +LA +S V M
Sbjct: 125 VDVLLKAGDQTDPIPAHKIILAASSEVLKQM 155
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,597,620
Number of Sequences: 28952
Number of extensions: 148275
Number of successful extensions: 365
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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