Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0169
(337 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0362 + 28739969-28740232,28740336-28740452,28740560-287406... 29 1.2
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 28 2.2
04_03_0200 - 12570414-12570712,12572704-12573007 27 2.9
03_05_0862 + 28353235-28354431 27 2.9
11_06_0164 + 20833525-20834685,20835053-20835124,20836302-208363... 27 3.8
11_03_0142 + 10675764-10675991,10676533-10676943 27 3.8
09_04_0569 + 18600750-18602117 27 3.8
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 27 5.0
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 26 6.6
04_01_0164 + 1858758-1858953,1859178-1859485 26 6.6
03_03_0249 + 15832086-15833261 26 6.6
12_01_0794 + 7285100-7285369,7285931-7286338 26 8.7
04_04_0129 + 22966109-22966203,22967305-22967358,22967947-229679... 26 8.7
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 26 8.7
04_03_0872 + 20452534-20453271 26 8.7
02_05_0189 + 26590489-26591529 26 8.7
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 26 8.7
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 26 8.7
>01_06_0362 +
28739969-28740232,28740336-28740452,28740560-28740660,
28741251-28741322,28741433-28741514,28741607-28741687,
28742548-28742589,28743009-28743047,28743278-28743343,
28743444-28743590,28743638-28743652
Length = 341
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 114 SLVAASEQEYSPALNPVVLIDNGRCGVREVPL 209
S V +E+ Y+P+++PV+L D R G + V L
Sbjct: 185 SFVDKTEKRYNPSMSPVILKDKWRKGSQWVAL 216
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 308 SLSPRPSVATGLAPSTGKRPRSRRTWTGVVA 216
+L RPSV G A +T + P SRR GV A
Sbjct: 97 TLYTRPSVLAGAASATTRSPSSRRGGGGVRA 127
>04_03_0200 - 12570414-12570712,12572704-12573007
Length = 200
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 314 GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRN 201
G + RPS G+A S+G + RS + W T K N
Sbjct: 109 GVEQAARPSCNAGIASSSGGKKRS-KAWEDFDITEKEN 145
>03_05_0862 + 28353235-28354431
Length = 398
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 208 FLVATTPVQVRLERGRFPVEGARPVATEGRGE 303
FLV + P RG VE RPVA G GE
Sbjct: 262 FLVESPPGSAGGRRGLMQVELLRPVAASGGGE 293
>11_06_0164 +
20833525-20834685,20835053-20835124,20836302-20836328,
20836419-20836496,20837005-20837046
Length = 459
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 226 PVQVRLERGRFPVEGARPVATEGRGERDA 312
P +V + + R P EGA VA G G+ A
Sbjct: 19 PARVAMHKRRLPAEGALSVARVGAGDEAA 47
>11_03_0142 + 10675764-10675991,10676533-10676943
Length = 212
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 92 LRLLICLNSAGDPSCRFLQPGDP 24
L +++C +S P+C+F+QP P
Sbjct: 163 LLVMLCKSSPACPNCKFVQPSVP 185
>09_04_0569 + 18600750-18602117
Length = 455
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SKLVDPRAAGIGTRDLPPNLSILVSGGKETNQDF 115
S L + AAGI RDL P +L + G T DF
Sbjct: 139 SALAELHAAGIAYRDLKPENVLLRADGHVTLTDF 172
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -2
Query: 198 PEHHI---SRYRLKQRDSVLGYIPVRSPLLRKSWLVSFPPLTNM 76
PEHH R + V+G+ P P+L+++ ++ LTN+
Sbjct: 22 PEHHAVYSGRIVTLNKSGVVGHRPAPPPVLQEAQILDVDDLTNL 65
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 264 YGKTAPFKTNLDRSRRDEKAEPPE 193
YG + P K NL+ S D AE P+
Sbjct: 613 YGNSTPEKGNLEDSETDSLAESPQ 636
>04_01_0164 + 1858758-1858953,1859178-1859485
Length = 167
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 314 GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKR 204
G S R S ATG + + WTGV +TR R
Sbjct: 101 GGSSPSRRSAATGSILRSHLHKAAMTKWTGVTSTRPR 137
>03_03_0249 + 15832086-15833261
Length = 391
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 302 SPRPSVAT-GLAPSTGKRPRSRRTWTGVVATRKR 204
SP PS A L +TGK PR WT A R
Sbjct: 222 SPAPSTARRSLDSATGKAPRWIEFWTDAAAAGDR 255
>12_01_0794 + 7285100-7285369,7285931-7286338
Length = 225
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 92 LRLLICLNSAGDPSCRFLQPGDP 24
L +++C +S P+C+F+QP P
Sbjct: 180 LLVMLCKSSPSCPNCKFVQPLAP 202
>04_04_0129 +
22966109-22966203,22967305-22967358,22967947-22967965,
22968097-22968210
Length = 93
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 96 FPPLTNMLKFGGRSLVPIP 40
+ P+TN+L G R +VP+P
Sbjct: 57 YQPVTNVLSLGYRIIVPLP 75
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 102 VSFPPLTNMLKFGGRSLVPIPAARGSTSLERRH 4
+SFP L ++ F G +L+P + S ++RH
Sbjct: 855 ISFPLLLDLSPFAGGALIPGQGPKPSAMNKQRH 887
>04_03_0872 + 20452534-20453271
Length = 245
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 333 SSNPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDE 211
S R++P+ + GP Y ++AP K + RR E
Sbjct: 134 SPTSAARAIPMTPRPKSAGPAAPYHQSAPVKVPVRPPRRQE 174
>02_05_0189 + 26590489-26591529
Length = 346
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVI 174
SP PS T LA G+R R + V + ++ T+P +
Sbjct: 24 SPNPSRVTPLASGRGRRGHHRVCASSVAPAQPASVAQPTAPAL 66
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 299 PRPSVATGLAPSTGKRPRSR 240
PRP VA L P + K PR+R
Sbjct: 80 PRPPVAVPLKPESPKPPRAR 99
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 126 PLLRKSWLVSFPPLTNMLK 70
P RK WL+ + P++NM++
Sbjct: 930 PASRKPWLMGWQPISNMIR 948
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,125,348
Number of Sequences: 37544
Number of extensions: 207986
Number of successful extensions: 730
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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