Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0169
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 2.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 2.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 2.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 2.5
Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical pr... 26 5.8
U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin p... 26 5.8
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 26 5.8
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 324 PTLR--SVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYR 172
PT R SV ++T RY P T+ + +L R R + + ++ ++YR
Sbjct: 96 PTSRADSVSSSSTFSRYRPDNSVSSTSTYTPSLSRYRSTDLSSTSDYSSTKYR 148
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 327 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEK 208
N L SVP ++L P TL A K++L + DEK
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEK 2625
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 327 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEK 208
N L SVP ++L P TL A K++L + DEK
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEK 2625
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 327 NPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEK 208
N L SVP ++L P TL A K++L + DEK
Sbjct: 2586 NVELHSVPSLSSLVEVNPNTLMQTLASEKSSLKAAEEDEK 2625
>Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical
protein T02B5.3 protein.
Length = 656
Score = 27.1 bits (57), Expect = 3.3
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = -3
Query: 257 KRPRSRRTWTGVVATRK 207
++PR ++TW+GV+ T+K
Sbjct: 64 RKPRPQKTWSGVLETKK 80
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 200 LPNTTSPVID*NNGIQC--WAIFLFARRY*GNPG*FLFLRLLICL 72
+PN +D NN I C ++IF F F+F+ LLI L
Sbjct: 184 VPNDQGSALDANNNINCLPFSIFKFLNSKFNMKTCFIFMLLLIAL 228
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 311 ASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTT 186
A +P+P+ + AP + K P +RR+ AT + N+T
Sbjct: 55 AKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTINST 96
>Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical
protein D1081.2 protein.
Length = 327
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 314 GASLSPRPSVATGLAPSTGKRPRSR 240
G S +P PS +TGL P+ GK+ + R
Sbjct: 24 GTSSTPTPSSSTGLLPN-GKKTKGR 47
>U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin
protein 4 protein.
Length = 381
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 138 PVRSPLLRKSWLVSFPPLTNMLKFGGRSLVP--IPAARGSTS 19
P++SPL S PL N+L+ R L P +P+ RG+ S
Sbjct: 75 PLQSPLSNDSTPSPVVPLQNLLEDRTRKLSPSELPSERGNIS 116
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 311 ASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTT 186
A +P+P+ + AP + K P +RR+ AT + N+T
Sbjct: 55 AKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTINST 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,628,126
Number of Sequences: 27780
Number of extensions: 149164
Number of successful extensions: 443
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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