Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0169
(337 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 28 1.3
At5g37020.1 68418.m04440 auxin-responsive factor (ARF8) identica... 27 2.4
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 27 3.1
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 27 4.1
At3g59620.1 68416.m06652 hypothetical protein 27 4.1
At3g47750.1 68416.m05202 ABC transporter family protein probable... 27 4.1
At1g74380.1 68414.m08617 galactosyl transferase GMA12/MNN10 fami... 26 5.4
At1g09980.1 68414.m01126 expressed protein contains Pfam profile... 26 5.4
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 26 7.2
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 26 7.2
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 26 7.2
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 26 7.2
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 26 7.2
At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containi... 26 7.2
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 26 7.2
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 26 7.2
At1g26330.1 68414.m03211 hypothetical protein 26 7.2
At4g21850.2 68417.m03160 methionine sulfoxide reductase domain-c... 25 9.5
At4g21850.1 68417.m03159 methionine sulfoxide reductase domain-c... 25 9.5
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 25 9.5
At3g09140.1 68416.m01075 expressed protein contains Pfam profile... 25 9.5
At1g21720.1 68414.m02719 20S proteasome beta subunit C1 (PBC1) (... 25 9.5
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP TGK+P R + G TRK + S +D
Sbjct: 376 SREPPTSMDKAPVTGKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 419
>At5g37020.1 68418.m04440 auxin-responsive factor (ARF8) identical
to auxin response factor 8 GI:4104931 from [Arabidopsis
thaliana]
Length = 811
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 181 PLSIKTTGFSAGLYSCSLAATKEIL 107
P+S+ +GF LYSC T E+L
Sbjct: 668 PMSLTDSGFQNSLYSCMQDTTHELL 692
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P ++ AP T K+P R + G TRK + S +D
Sbjct: 512 SREPPISMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 555
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S +P + AP T K+P R + G TRK + S +D
Sbjct: 608 SRKPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 651
>At3g59620.1 68416.m06652 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 220 TTPVQVRLERGRFPVEGAR 276
T P Q E GR PVEGAR
Sbjct: 62 TEPFQFDREHGRVPVEGAR 80
>At3g47750.1 68416.m05202 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 944
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 308 SLSPRPSVATGLAPSTGKRPRSRRT-WTGVVATRK 207
SL P V PSTG P SRR+ WT + +K
Sbjct: 774 SLIGSPKVVYMDEPSTGLDPASRRSLWTAIKGAKK 808
>At1g74380.1 68414.m08617 galactosyl transferase GMA12/MNN10 family
protein very low similarity to
alpha-1,2-galactosyltransferase, Schizosaccharomyces
pombe [SP|Q09174]
Length = 457
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 283 LRAWHPLRENGPVQDELGQ 227
L AW P+ GP++DE G+
Sbjct: 285 LDAWAPMGPKGPIRDEAGK 303
>At1g09980.1 68414.m01126 expressed protein contains Pfam profile
PF05057: Protein of unknown function (DUF676);
non-consensus GC donor splice site at exon boundary
144764
Length = 802
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 79 YA*IRREIP--RADSCSPGIH*FRAPP 5
Y+ I +IP +D+C+ +H FR PP
Sbjct: 153 YSPIMEDIPVTHSDACAAAVHEFRIPP 179
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 512 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 555
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 512 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 555
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 510 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 553
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 512 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 555
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 512 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 555
>At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 408
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 95 KETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSAFSSRRLLSK 235
KE + ++ + GI P E+ +NR +++C GSA SS ++++
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLET--YNRMIKVFCESGSASSSYSIVAE 212
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 492 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 535
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains
Pfam profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 510 SREPPTSMDKAPVTAKKPSRRMSTKGSTGTRKSSRLTRVSHDVD 553
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 292 PPSLRAWHPLRENGPVQDEL 233
P SL AWHP+ + ++D +
Sbjct: 1034 PTSLFAWHPVHSHSTIEDNV 1053
>At4g21850.2 68417.m03160 methionine sulfoxide reductase
domain-containing protein / SeIR domain-containing
protein low similarity to pilin-like transcription
factor [Homo sapiens] GI:5059062, SP|P14930 Peptide
methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6)
{Neisseria gonorrhoeae}; contains Pfam profile PF01641:
SelR domain
Length = 121
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 293 PSVATGLAPSTGKRPRSRRTWTGVVA 216
P+ AT +APSTG + + W +++
Sbjct: 2 PTSATAVAPSTGSVQKKDQDWRAILS 27
>At4g21850.1 68417.m03159 methionine sulfoxide reductase
domain-containing protein / SeIR domain-containing
protein low similarity to pilin-like transcription
factor [Homo sapiens] GI:5059062, SP|P14930 Peptide
methionine sulfoxide reductase msrA/msrB (EC 1.8.4.6)
{Neisseria gonorrhoeae}; contains Pfam profile PF01641:
SelR domain
Length = 143
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 293 PSVATGLAPSTGKRPRSRRTWTGVVA 216
P+ AT +APSTG + + W +++
Sbjct: 2 PTSATAVAPSTGSVQKKDQDWRAILS 27
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 302 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 171
S P + AP T K+P R + G TRK + S +D
Sbjct: 458 SREPPTSMDKAPVTAKKPSRRMSTKGSTETRKSSRLTRVSHDVD 501
>At3g09140.1 68416.m01075 expressed protein contains Pfam profile
PF05056: Protein of unknown function (DUF674);
expression supported by MPSS
Length = 473
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 333 SSNPTLRS-VPLAATLRRYGPGTLYGKTAPFK 241
SS +RS +PL+ TL+ G G + G+T FK
Sbjct: 251 SSLQMIRSRIPLSPTLQGSGDGAVPGQTITFK 282
>At1g21720.1 68414.m02719 20S proteasome beta subunit C1 (PBC1)
(PRCT) almost identical to GB:AAC32069 from [Arabidopsis
thaliana], EST gb|T76747 comes from this gene; identical
to cDNA proteasome subunit prct GI:2511567
Length = 204
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 20 LVDPRAAGIGTRDLPPNLSILVSGGKETNQDFLSSG 127
L P AG+G D P ++ G KE +DF+ SG
Sbjct: 104 LCQPVIAGLGDDDKPFICTMDSIGAKELAKDFVVSG 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,416,974
Number of Sequences: 28952
Number of extensions: 145563
Number of successful extensions: 417
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 389454624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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