Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0168
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    26   0.23 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.0  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 93  EDLREVFQSDNVYRPSWTREVPQNY 167
           ED+ +VFQ   ++RP+W  E+   +
Sbjct: 79  EDVHKVFQHLMIHRPNWWHELETKF 103


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 459 AQPLRNEVGGADNDIVLRLHHHRN 388
           A P+ NE+ G  N   L+ +H R+
Sbjct: 446 ADPVTNEIKGVYNMTNLKFYHRRD 469


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 70  DHGTLDWVKICEKSSKVITFIDLAGHERYLKTT 168
           D     W+     +SKV   +   GH  YL++T
Sbjct: 226 DSSVQSWLSGGASASKVTLSVPFYGHSWYLQST 258



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 252 FLGHSYYTRVGSDHE 208
           F GHS+Y +  S+H+
Sbjct: 248 FYGHSWYLQSTSNHD 262


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 269 RASPRCSLVIPTIPALAPIMSIPKSGACPVIPKTVVL 159
           RA  +C   +  +P+L+  +S+  +  CP I   +++
Sbjct: 139 RAVRKCLYKLWKMPSLSEFLSLFGTETCPAIGSAILI 175


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 269 RASPRCSLVIPTIPALAPIMSIPKSGACPVIPKTVVL 159
           RA  +C   +  +P+L+  +S+  +  CP I   +++
Sbjct: 139 RAVRKCLYKLWKMPSLSEFLSLFGTETCPAIGSAILI 175


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 64 YSQHYPYYQS 35
          YS+HY Y+QS
Sbjct: 17 YSKHYSYWQS 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,349
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)