Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0168
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 43 4e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 36 0.004
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 29 0.44
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 29 0.77
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 29 0.77
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 2.3
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 27 3.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.1
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 27 3.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 4.1
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 26 4.1
SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1 ... 26 4.1
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 26 5.4
SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces pom... 26 5.4
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 5.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 5.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 7.2
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 25 7.2
SPAC6G10.03c |||abhydrolase family protein, unknown biological r... 25 7.2
SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyce... 25 7.2
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 25 9.5
SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly prot... 25 9.5
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 42.7 bits (96), Expect = 4e-05
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 103 EKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIVGMTKEHLGLALALSV 282
E +++ +D GH Y+K + G D ++++ A G + T+EHL LA + V
Sbjct: 112 ETANRHYAHVDCPGHADYIKNMITGAA--TMDGAIIVVSATDGQMPQTREHLLLARQVGV 169
Query: 283 PVFVV-VTKIDMCPPNVLQ 336
VV + K+DM P++++
Sbjct: 170 KQIVVYINKVDMVEPDMIE 188
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 130 IDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIV--GMTKEHLGLALALSVP 285
I++ G+ +LKTTV G+ + G N G++ + +E L + ++ P
Sbjct: 285 IEIVGYGSHLKTTVTGIEMFKKQLDAAVAGDNCGLLLRSIKREQLKRGMIVAQP 338
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 103 EKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIVGMTKEHLGLALALSV 282
+K SK ITF+D GH + G + D +L++ + G+ T E + + V
Sbjct: 216 DKGSKFITFLDTPGHMAFEAMRKRG--ANIADIVVLVVAGDDGVKPQTVEAIKHIQSADV 273
Query: 283 PVFVVVTKID 312
PV V +TK D
Sbjct: 274 PVVVALTKSD 283
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 310 DMCPPNVLQDNLKLLIRILKSSGCRKVPVMVKSKDDVIVSATNFVSQ 450
+MC P L+L ++ KSS R + + K++ T+FVSQ
Sbjct: 170 EMCEPETRLSFLQLALQAEKSSSRRNREYVARKKEEAFDYLTSFVSQ 216
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 28.7 bits (61), Expect = 0.77
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 221 APIMSIPKSGACPVIPKTVVL-RYLSCPARSINVITLEDFSQI 96
AP++ P+ G C P+ + L SC AR IN +T ED+ ++
Sbjct: 331 APLLHCPRKGRCFCKPEEIDLSSNSSCIARFIN-LTNEDYDEL 372
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 28.7 bits (61), Expect = 0.77
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 82 LDW-VKICEKSSKVITFIDL----AGHERYLKTTVFGMTGHAPDFGML 210
+DW K K +V+ FI L AG Y K FGM G A DF L
Sbjct: 682 VDWFTKKMPKIVRVVVFISLYAIIAGVFIYFKDVTFGMHGPASDFHRL 729
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 302 VTTTNTGTDKARASPRCSLVIPTIPALAPIMSIPKSGACPVIPKT 168
V+ + D +RA+P S+ PT+P+ AP +G+ + P T
Sbjct: 476 VSMKPSADDHSRATPTRSVEAPTLPSYAPRHPTQANGSRYMNPST 520
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 335 CRTLGGHMSILVTTTNTGT 279
C+TLG HM++ V T GT
Sbjct: 132 CKTLGKHMNVKVMVTTGGT 150
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 3.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 313 MCPPNVLQDNLKLLIRILKSSGC 381
+ PPN+L +NL+L ++ + C
Sbjct: 2609 LSPPNILDENLRLAASLITTDSC 2631
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 623 VPDTTVPTPGTEYVSSIWNSAGLSSCEGILVFNRFRNIVNSSRFSPLTFETWN-IGH 456
VP T + T G + ++ NS LSS + V N V + +P T WN I H
Sbjct: 106 VPQTNLETTGIAFQLTV-NS--LSSSNQLSVIRSSTNTVKGRKKNPTTNSNWNGISH 159
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -1
Query: 374 DDLRILMSSLRLSCRTLGGHMSILVTTTNTGTDKARASPRCSLVIPTIPALAPIMSIPKS 195
DD+R + L+ + GG +T ++ A P+ S PT P P MS+P
Sbjct: 1662 DDIRSSKDAAALAAKLFGGMAPAHPVSTPPVRPQSAAPPQMS--APTPP--PPPMSVPPP 1717
Query: 194 GACPVIP 174
+ P +P
Sbjct: 1718 PSAPPMP 1724
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 408 EGRCHCQRHQLRFAKAVPNIPSFEREWGEP 497
+ R C R +R +K + N P+ +W P
Sbjct: 2117 QSRIFCFREPIRISKLLQNFPALLSKWSTP 2146
>SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 349 LLIRILKSSGCRKVPVMVKSKDDVIVSATNFVSQRLCPIFQVSNV 483
+ I +KS+GC K+ V + +D ++V + + PI SN+
Sbjct: 97 IFITAMKSNGCCKLIVSEEEEDLIVVDSNGSYAVTCDPIDGSSNI 141
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 366 EDPDEQLEIVLQNVRRAHVNLGDDN 292
E PD+ +E+V N +RA + +DN
Sbjct: 296 EVPDDSVELVQANFQRAQTKIENDN 320
>SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 185 PVIPKTVVLRYLSCPARSINVI 120
P++P V LR+L+CP VI
Sbjct: 25 PLVPSDVKLRFLTCPQPGAAVI 46
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 372 IGVQEGSGDGEVEGRCHCQRHQLRFAKAVPNIPSFEREW 488
IG+ +G GDG+V+ R + FA+ + + +++W
Sbjct: 1726 IGIGDGDGDGDVDSR------TIHFAEYKSRVQAVKKQW 1758
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 372 IGVQEGSGDGEVEGRCHCQRHQLRFAKAVPNIPSFEREW 488
IG+ +G GDG+V+ R + FA+ + + +++W
Sbjct: 1726 IGIGDGDGDGDVDSR------TIHFAEYKSRVQAVKKQW 1758
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 363 DPDEQLEIVLQNVRRAHVNLGDDNEYWH*QGKS 265
D E +++ VRR +VN+G N H G +
Sbjct: 1088 DETEVPDVINARVRRKNVNIGSSNSIRHVSGST 1120
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 78 HS*LGEDLREVFQSDNVYRPSWTREVPQNYGLWDDGTRSRLWDAHDRSQRGYSRNDQG 251
H L DL + Q + RP+ +VP GL D LW D+ G+ ND+G
Sbjct: 172 HGGLSPDLNSMDQIQRIMRPT---DVPDT-GLLCD----LLWSDPDKDLTGWGDNDRG 221
>SPAC6G10.03c |||abhydrolase family protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 512 IVNSSRFSPLTFETWNIGHSLCETKLVALTM 420
+ + RF + ETW IGH + + LV +M
Sbjct: 151 VEETERFFTESLETWRIGHGIEKMILVGHSM 181
>SPBC342.03 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 22 NDILGFDNMGNVVNKPDHGTLDWVKICEKSSK 117
+++LGF + VVN D + WVK + K
Sbjct: 147 DNVLGFFSGNEVVNDEDTTAITWVKAVTRDVK 178
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 135 PSWTREVPQNYGLWDDGTRSRLWDAHDRS 221
P W P+ +G +DG R ++ D S
Sbjct: 160 PDWNITPPEGFGWEEDGLRGHVFSNDDNS 188
>SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly protein
Cbp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 283
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 150 EVPQNYGLWDDGTRSRLWDAHDRSQRGYSRNDQ 248
E+P + W T+ LW H R RG +N++
Sbjct: 131 EIPMTFQSWFQITQLHLWILHTRI-RGLPKNEK 162
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,625,705
Number of Sequences: 5004
Number of extensions: 55859
Number of successful extensions: 221
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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