Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0168
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 42 4e-06
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 25 0.84
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 25 0.84
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 25 0.84
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 25 0.84
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 5.9
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 5.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 7.8
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 7.8
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 42.3 bits (95), Expect = 4e-06
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +1
Query: 106 KSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIVGMTKEHLGLALALSVP 285
+S + +TF+D GH ++ G H D +L++ A+ G+ T + + +A VP
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRG--AHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVP 247
Query: 286 VFVVVTKIDMCPPNVLQDNLKLLIRILK 369
+ V + KID PN+ D +K+ + K
Sbjct: 248 IIVAINKID--KPNI--DIIKVQYELAK 271
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 24.6 bits (51), Expect = 0.84
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 DNMGNVVNK-PDHGTLDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLM 213
+ M ++++ P+ G ++W KI E ++ T + GH + T + T + D+ L+
Sbjct: 53 EQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY--TDGSDDYSTLI 109
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 24.6 bits (51), Expect = 0.84
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 DNMGNVVNK-PDHGTLDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLM 213
+ M ++++ P+ G ++W KI E ++ T + GH + T + T + D+ L+
Sbjct: 101 EQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY--TDGSDDYSTLI 157
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 24.6 bits (51), Expect = 0.84
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 DNMGNVVNK-PDHGTLDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLM 213
+ M ++++ P+ G ++W KI E ++ T + GH + T + T + D+ L+
Sbjct: 101 EQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY--TDGSDDYSTLI 157
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 24.6 bits (51), Expect = 0.84
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 40 DNMGNVVNK-PDHGTLDWVKICEKSSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLM 213
+ M ++++ P+ G ++W KI E ++ T + GH + T + T + D+ L+
Sbjct: 101 EQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVAINETTY--TDGSDDYSTLI 157
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 329 TLGGHMSILVTTTNTGTDKARASPRCSLVIPT 234
T G++S L TT NT + PR SLV T
Sbjct: 718 TTTGNVSYL-TTNNTSNNSQLQIPRASLVSTT 748
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -1
Query: 647 ARTTPASAVPDTTVPTPGTEYVSSIWNSAGLSSCEGIL 534
A P DTT T ++ + W S LS+ G++
Sbjct: 1077 AEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVI 1114
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 144 TREVPQNYGLWDDGTRSR 197
+ E P N GLWD R
Sbjct: 214 SEEAPGNMGLWDQALALR 231
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 144 TREVPQNYGLWDDGTRSR 197
+ E P N GLWD R
Sbjct: 214 SEEAPGNMGLWDQALALR 231
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 623 VPDTTVPTPGTEYVSSIWNSAGLSSCEGILVF 528
VP+ + GT+Y + SA C GI V+
Sbjct: 194 VPEGNMTACGTDYFNRGLLSASYLVCYGIWVY 225
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 623 VPDTTVPTPGTEYVSSIWNSAGLSSCEGILVF 528
VP+ + GT+Y + SA C GI V+
Sbjct: 70 VPEGNMTACGTDYFNRGLLSASYLVCYGIWVY 101
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,220
Number of Sequences: 438
Number of extensions: 3705
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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