Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0167
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 32 0.076
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 29 0.93
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 28 1.6
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 28 1.6
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 27 2.1
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 5.0
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 26 5.0
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 5.0
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 25 8.7
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 8.7
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 32.3 bits (70), Expect = 0.076
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 607 VHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKS 726
+++N + A LK+ Y A+ ++ + C P+ AKA +R++
Sbjct: 41 LYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRA 80
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 28.7 bits (61), Expect = 0.93
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 592 DERLRVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAM 744
D + ++N AA L Y L +VL +AKA YR ++ L A+
Sbjct: 99 DIEIACYSNRAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVAL 149
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 327 WSNNRSFILGFITLSD*SKALTWFKSH 247
W++N ++ILGFIT + +L F+ H
Sbjct: 251 WASNFAWILGFITNKEIENSLESFRKH 277
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 616 NMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRILSAM 744
N AAA++ + AL L + K YRK++ L AM
Sbjct: 114 NRAAAEIALSQFPEALADANAALKIRNNYGKCYYRKAKALEAM 156
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 142 LGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPG 264
+G ++++G D + M GE+ L + P + YG G PG
Sbjct: 51 IGVGQLIRGWDEGVPKMSLGEKAKLTITPDYGYGPRGF-PG 90
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 604 RVHNNMAAAQLKAGAYEAALQAVTRVLSCQPKNAKALYRKSRIL 735
R N AAA LK A ++ + + P AKA RK++ L
Sbjct: 434 RGFGNRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQAL 477
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 26.2 bits (55), Expect = 5.0
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 421 IRRRARGNWWYGRDEPQLAVQLYRRALDILD---ESEGGITDPTPSGELTFANQAL---- 579
+ + A GN + EP L VQ + D+ E+E + + S E + Q+
Sbjct: 88 VEKDATGNPQESKQEPNLEVQQTEKEKDVDSASAENESINSSSSSSKECSTQTQSKHYNL 147
Query: 580 -KELLDERLRVHNNMAAAQLKA 642
+++ R+R H N AAA+ A
Sbjct: 148 HRDIFQMRIRYHANRAAAEKTA 169
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 493 RALDILDESEGGITDPTPSGELTFANQALKELLDERLRVHNNMAAAQLKAGAYEAAL 663
RAL +LD+ E I G L + N L++LL L +N+ +L YE +L
Sbjct: 862 RALLLLDKREQAIDLVKTYGHLHYINFVLEKLLSSSLLTYNSSQRDKL---LYEVSL 915
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 472 LAVQLYRRALDILDESEGGITDPTPSGE 555
L V+ R LD+LD+S+ +T P+ + E
Sbjct: 208 LHVESARAGLDLLDQSDFSLTSPSSAKE 235
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 196 CTLKLMLGPNLAIPHCLLNIFYLISFLHNVVTVFYFEFIADSAYV 62
C L L PNLA+P + + ++ + + Y+++ D Y+
Sbjct: 365 CPLSLSFRPNLALPLSMDSSDVVLLCVKKAASWKYYKYTIDGIYI 409
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,126,885
Number of Sequences: 5004
Number of extensions: 67191
Number of successful extensions: 188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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