Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0162
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.6  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   3.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.8  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 56   TNSIRP-NLHQYLERDSTIWHR 118
            T+ +RP NL Q+L RD+  W R
Sbjct: 974  TDPVRPENLQQHLLRDAESWSR 995


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 110 WHRAIQDDTYLKTPSADRLKPILSQSSKWHSVEGL 214
           W   I+D     TP   R+K I S+S    SV+GL
Sbjct: 93  WADTIEDVIMRSTPDGMRIKQIYSESMT--SVDGL 125


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -1

Query: 408  LLFW*RYSVFGASSFSSVWYRCL 340
            L+FW  +++ G   F+  +++C+
Sbjct: 1442 LIFWLIFAIMGVQLFAGKYFKCV 1464


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 76   LTPIPGEGLDDLAQSHSRRHLLEDAQR*STETDSESKLQMAQR 204
            L+PI        AQ  +R H+L D Q+      S  +L+  +R
Sbjct: 1152 LSPILSPRRRRQAQRQARAHMLPDRQQNGRAVSSAEELERRRR 1194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,551
Number of Sequences: 2352
Number of extensions: 11029
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)