Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0159
         (316 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   0.76 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   1.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   1.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   7.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   7.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    19   9.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +1

Query: 112 PSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN---PLPDKDAIE-AEKEKNKFLNG 279
           P  EDV  ++ + +  +  +K  + + K+TE +E N   P+  ++A + +++E  +F   
Sbjct: 245 PKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRNADDISQEEYGEFYKS 304

Query: 280 IEN 288
           + N
Sbjct: 305 LTN 307


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 181 NQTSRYRRIKTSG-SSQWRRLQQTEAQSFHWCRRHGDS 71
           NQ   +++   +  S++   + +  A  + W + HGDS
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDS 178


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 181 NQTSRYRRIKTSG-SSQWRRLQQTEAQSFHWCRRHGDS 71
           NQ   +++   +  S++   + +  A  + W + HGDS
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDS 178


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 181 NQTSRYRRIKTSG-SSQWRRLQQTEAQSFHWCRRHGDS 71
           NQ   +++   +  S++   + +  A  + W + HGDS
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDS 178


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 47   VSSKASTPAVSVTSTPMKRLCFRL 118
            V++    P +++TST    L F+L
Sbjct: 1393 VNAPPHAPQIALTSTTTNSLTFKL 1416


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 7   LVDPRAAGRTDLKSQLEGFNTSCLRDVD 90
           ++DP  AG +++      F   CL D+D
Sbjct: 50  VLDPWFAGSSNVGINKWRFLLQCLEDLD 77


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 39  VCATCSPGIH*F 4
           VCATCS  I  F
Sbjct: 933 VCATCSSDIQLF 944


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 39  VCATCSPGIH*F 4
           VCATCS  I  F
Sbjct: 933 VCATCSSDIQLF 944


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 122 KTSPLRRPRSLYSTV 166
           K   +R+PR++YS++
Sbjct: 117 KGKKMRKPRTIYSSL 131


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/30 (23%), Positives = 14/30 (46%)
 Frame = -1

Query: 157 IKTSGSSQWRRLQQTEAQSFHWCRRHGDSW 68
           +++ G+SQW       +  +     H D+W
Sbjct: 476 VQSWGASQWPDTPDLISDGYRVIISHVDAW 505


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 178 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 270
           DS +L   +  EK P PD+   + E   + F
Sbjct: 76  DSRRLPLRDAVEKRPPPDEPIDDYEPSFDLF 106


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 62  STPAVSVTSTPMKRLCFRLLKT 127
           +TP    T TP +R  FR++ +
Sbjct: 330 NTPLEVFTITPGRRYRFRMINS 351


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 62  STPAVSVTSTPMKRLCFRLLKT 127
           +TP    T TP +R  FR++ +
Sbjct: 330 NTPLEVFTITPGRRYRFRMINS 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.307    0.127    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,804
Number of Sequences: 336
Number of extensions: 1219
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.8 bits)