Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0159
(316 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 71 2e-13
SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21) 33 0.064
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 30 0.45
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.45
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 30 0.45
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 0.45
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.45
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 28 1.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 1.8
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 27 2.4
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 27 2.4
SB_53645| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 27 3.2
SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3) 27 3.2
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35) 27 3.2
SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_29621| Best HMM Match : Halo_GVPC (HMM E-Value=5.3) 27 4.2
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 27 4.2
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 27 4.2
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 26 5.6
SB_39562| Best HMM Match : DMAP1 (HMM E-Value=1.8) 26 5.6
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_50248| Best HMM Match : PPC (HMM E-Value=7.2) 26 7.4
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22) 26 7.4
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 25 9.8
SB_42524| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 25 9.8
SB_30608| Best HMM Match : RFX1_trans_act (HMM E-Value=3.1) 25 9.8
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 25 9.8
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_40770| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 25 9.8
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 25 9.8
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 25 9.8
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 25 9.8
SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 70.9 bits (166), Expect = 2e-13
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +1
Query: 43 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNP 222
+++++ F S L+ V+T EK LP+ + +A EK + + F G+E F ++LKH ET EKNP
Sbjct: 451 RAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNP 509
Query: 223 LPDKDAIEAE--KEKNKFLNGIENFDPTKLKH 312
LPD I AE E + + FD +KLKH
Sbjct: 510 LPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKH 541
Score = 69.3 bits (162), Expect = 6e-13
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +1
Query: 37 DLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFD--GIEKFDSSQLKHTETQ 210
D +++++ F+ S L+ V+T EK LPSA + E + L D + FD+S+LKH E Q
Sbjct: 638 DSRAEVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQ 697
Query: 211 EKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKH 312
EKNPLP KD I E + + ++ FD +KLKH
Sbjct: 698 EKNPLPTKDDITTESTETR--AEVKTFDHSKLKH 729
Score = 66.9 bits (156), Expect = 3e-12
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +1
Query: 43 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNP 222
+S++ F+TS L+ V+T EK+V+P+ + + E ++ FD S+LKH TQEKNP
Sbjct: 528 RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNP 585
Query: 223 LPDKDAIEAEK-EKNK-FLNGIENFDPTKLKH 312
LP + E KNK + + +FD TKLKH
Sbjct: 586 LPTPQTLHEELIPKNKPDRSEVASFDHTKLKH 617
Score = 66.5 bits (155), Expect = 4e-12
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +1
Query: 31 RTDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTE 204
RT S +E F + L+ V+T EK LP A+++ E + L D E KFD+S+LKH E
Sbjct: 484 RTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVE 543
Query: 205 TQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKH 312
T+EK +P KD IEAE ++ +++FD +KLKH
Sbjct: 544 TKEKVVMPTKDVIEAEAIDSR--AEVKSFDHSKLKH 577
Score = 61.7 bits (143), Expect = 1e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1
Query: 46 SQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPL 225
S + F+ S L+ V+ EK LP+ +D+ TE T+ ++ FD S+LKH +T+EKNPL
Sbjct: 681 SAVASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPL 738
Query: 226 PDKDAIEAEK 255
PD I EK
Sbjct: 739 PDAKTIAQEK 748
Score = 54.0 bits (124), Expect = 2e-08
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +1
Query: 37 DLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQ 210
D +++++ F+ S L+ V T EK LP+ + + E K+ D E FD ++LKH TQ
Sbjct: 562 DSRAEVKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQ 621
Query: 211 EKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKH 312
EK+ +P ++ I+ E ++ +++FD +KLKH
Sbjct: 622 EKSIMPSQEDIKEEAVDSR--AEVKSFDHSKLKH 653
Score = 48.0 bits (109), Expect = 2e-06
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 88 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 267
DT ++I P +E + K + KFD++ LKH +T+EKN LP + I+ E + ++
Sbjct: 389 DTPQQI-WPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDE 447
Query: 268 FLN--GIENFDPTKLKH 312
F + +++F+ +KL+H
Sbjct: 448 FPDRAEVKSFEKSKLQH 464
>SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)
Length = 900
Score = 32.7 bits (71), Expect = 0.064
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 82 DVDTNEKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 258
DV + P+ A EKT K + DG +EK+ + +T + L D D E+E
Sbjct: 341 DVIGKPPAIPPAQVQAAEEKTPKDIIDGLLEKYKEIGSQMADTSADDGLDDDD---VEEE 397
Query: 259 KNKFLNGIENFDPTKLK 309
+ L+ + F TK K
Sbjct: 398 DDDVLDEADRFRDTKRK 414
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 29.9 bits (64), Expect = 0.45
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 109 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 228
L S D EKT D +E+F S +H T +KNPLP
Sbjct: 194 LSSRSDHVQEKT-----DRLEQFSSQTGRHINTTKKNPLP 228
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 0.45
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 144 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 49
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 29.9 bits (64), Expect = 0.45
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 22 AAGRTDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDV------ATEKTQKSLFDGIEKFDS 183
A R +L+ + ++D+ T E+++ AED A E ++++F+ EK +S
Sbjct: 1119 AHARLELREKQLQELAGTMKDLTTEEELIASYAEDAERAAEAAKEYRERTMFEIAEKINS 1178
Query: 184 ---SQLKHTETQEKNPLPDKDAIEAEKEKNK 267
+ + TE Q+K + +EAE E+ +
Sbjct: 1179 IKEQRRQQTEAQKKKMDEEIRRLEAELEEER 1209
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 29.9 bits (64), Expect = 0.45
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -2
Query: 144 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 49
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 103
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.9 bits (64), Expect = 0.45
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 1 SKLVDPRAAGRTDLKSQLEGFNTSCLRDVDTNEKIV---LPSAEDVATEKTQKSLFDGIE 171
+ +VDPR A K+ LE F S +RD + E I+ + SA TEK Q + +
Sbjct: 805 ASVVDPRVASAA-AKAALEEF--SKMRD-EIPEAIIDSHVKSATSAKTEKDQDEEDNSEQ 860
Query: 172 KFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKL 306
+ E ++ P+ + EKE L EN P ++
Sbjct: 861 NKSVDEAMQVEEEKTAEQPEAAPSKEEKEPETALGASENESPLEV 905
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 184 SNQTSRYRRIKTSGSSQ-WR 128
+N+TS+YRRI+ GS Q WR
Sbjct: 62 TNRTSKYRRIRRRGSRQTWR 81
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 118 AEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEK 255
++D EKT+ S+ + + DSS T+EK +KD E+
Sbjct: 1546 SDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLER 1591
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 238 HLCPEAGSSPESRCASAGSNQTSRYRR 158
HL S P SRCA + S+ + RYRR
Sbjct: 449 HLLVCNASDPNSRCAQSCSSFSRRYRR 475
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 136 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEK 261
E+ Q+ E+ + + KH E +EK +K+ +E EK+K
Sbjct: 336 ERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQK 377
>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
Length = 590
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 180 FEPAEAHRDSGEEPASGQRCYRSGEG 257
FEP E H DSG+E Y EG
Sbjct: 266 FEPMEIHDDSGDEDVDSDDDYDDREG 291
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/74 (18%), Positives = 37/74 (50%)
Frame = +1
Query: 13 DPRAAGRTDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQL 192
DP+ +G T+ +L+G T+ + +D P+ + ++ ++ + + + D +
Sbjct: 1016 DPKKSGNTERVQELQGVVTTDRQTIDD------PNTSESRRQEARERNEERLSEIDELER 1069
Query: 193 KHTETQEKNPLPDK 234
K+ E + + PL ++
Sbjct: 1070 KNRELENQKPLRER 1083
>SB_53645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 85 VDTNEKIVLPSAEDVATEKTQKSLFDGIEKF-DSSQLKHTET-QEKNP 222
VD +E +++ S+ D + EK S +EK+ S Q K T++ QEK P
Sbjct: 53 VDDHEVVIVVSSHDSSEEKRHLSTRYNLEKWPGSDQEKWTDSFQEKIP 100
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 148 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHT 315
KS+F + + + TET+E NP D +AE+ + G + T+ K T
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTT 331
>SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3)
Length = 866
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 160 DGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 267
D +E FD++ L HT+ N +++ +E +K++
Sbjct: 73 DNLEGFDNADLDHTDQSGINVKSEQEFVEVHLQKSR 108
>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 202 RCASAGS---NQTSRYRRIKTSGSSQWRRLQQTEAQSFHWCRRHGD 74
RC G ++TS Y ++ SGSS RRL+ S+ R GD
Sbjct: 29 RCRVIGEFELSKTSSYGDVELSGSSSRRRLRVMAMSSYRGVRVIGD 74
>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
Length = 430
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +1
Query: 31 RTDLKSQLEGFNTSCLRDVDT----NEKIVLPSAEDVATEKTQ-KSLFDGIEKFDSSQLK 195
RT +K +LE ++ D++T ++ LP+A V T+K+ K + + S + K
Sbjct: 232 RTLIK-ELEPTDSRLEEDIETLLAMHKNGELPNASMVQTKKSNLKVKLNMRHQAKSKKRK 290
Query: 196 HTETQEKNPLPDKDAIEAEKEKNK 267
HT+ ++ +PL + ++ +K K K
Sbjct: 291 HTDKEDIDPLAYYEEVKMKKMKAK 314
>SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 106 VLPSAEDVATEKTQKSLFDGIEKFDSSQ 189
++ A ++ATE+T K + G+E+ D Q
Sbjct: 35 IVAGAAEIATEQTNKIIDKGLERVDEQQ 62
>SB_29621| Best HMM Match : Halo_GVPC (HMM E-Value=5.3)
Length = 471
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 79 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTE 204
RD TN++I+L ED+ +K + D I D+ L+ E
Sbjct: 413 RDEATNDQIILDGEEDLLDIDQEKCVEDQIPLDDAKYLQDVE 454
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 79 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 258
R D +E + P ED T+ + G+ D+SQLK + K +D E +
Sbjct: 552 RGDDESEYTMFPEFEDEITDVNET----GVPADDTSQLKVQQPGHKRAFDAEDKKEPSAK 607
Query: 259 KNK 267
KN+
Sbjct: 608 KNQ 610
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 53 SKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLI 181
S A TP +VT TP+K + T R+ SL++ +S+ L+
Sbjct: 840 SPAKTPTKTVTDTPVKESPVKFSPTGK-RKKFSLHALLSQPLV 881
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 31 RTDLKSQLEGFNTSCLRDVDTNEKI-VLPSAEDVATEKTQKSLFDGIEKFDSSQLK 195
R DLK E F +C+ + D EK+ V + K Q+ D ++ +Q K
Sbjct: 3204 RGDLKRTKESFREACIENSDLREKLSVTEEKLERVDAKLQELENDNVDALAEAQAK 3259
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 175 FDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLK 309
+D Q K E PD+D +E E+E NG+E+ D K
Sbjct: 839 YDVKQRKRLEQHASYEAPDEDEMEIERE---LQNGLESGDEDDTK 880
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 142 TQKSLFDGIEKFDSSQLKHTET---QEKNPLPDKDAIEAEKEKNKFLNGIENF 291
T L+ E+FD + H E +EKN + A E+ KNK + E F
Sbjct: 480 TLACLYVDTEQFDKADTMHREVLHIKEKNNTITRGAAYREQVKNKLVKLAEEF 532
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 26.2 bits (55), Expect = 5.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 13 DPRAAGRTDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 183
D A D S++E N + +++ K+ L ++ A QKS IEK
Sbjct: 2022 DALLAAEADYHSKMEEMLKKNEEDMENLNKEHKLKLDELQE-AHRLDQKSEVAAIEKKLK 2080
Query: 184 SQLKHTETQEKNPLPDKDAI 243
+Q+K + + K L K+A+
Sbjct: 2081 TQMKKNQNEMKKLLNHKEAL 2100
>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 58 GFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKD 237
G N +CL DV++ + + S ED E F +E+ S + ++ D
Sbjct: 246 GINDACLVDVNSEDFNLTLSDEDCDIEGASFGAFSSMEEHSISVSSKITSSTEDETEDSG 305
Query: 238 AIEAEKE 258
E E++
Sbjct: 306 QGECERD 312
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 217 SSPESRCASAGSNQTSRYRRIK-TSGSSQWRRLQQTEAQS 101
S +S C++ GS TSR K T+GS+ R +Q+ +S
Sbjct: 667 SGKDSTCSTRGSRDTSRDTSCKDTTGSAGTRPTRQSPRKS 706
>SB_39562| Best HMM Match : DMAP1 (HMM E-Value=1.8)
Length = 351
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 88 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 219
DTN S +++ + + S G + DS+ L+ TETQ K+
Sbjct: 128 DTNSGSCKNSGDEMQNSRQRSSSNKGSLELDSNGLESTETQMKH 171
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +1
Query: 166 IEKFDSSQLKHTETQ--------EKNPLPDKDAIEAEKEKNKFLNGIE 285
I+K D+ L T+ + EK P+ D+D ++ E E + G+E
Sbjct: 294 IDKLDAQALSMTQAEFNKKMFGDEKGPVSDQDRVDGESEPDVTCKGLE 341
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 217 SSPESRCASAGSNQTSRYRRIK-TSGSSQWRRLQQTEAQS 101
S +S C++ GS TSR K T+GS+ R +Q+ +S
Sbjct: 1334 SGKDSTCSTRGSRDTSRDTSCKDTTGSAGTRPTRQSPRKS 1373
>SB_50248| Best HMM Match : PPC (HMM E-Value=7.2)
Length = 427
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 119 LKTSPLRRPRSLYSTVSRSLI 181
+KTSP RRP S+ S SR +
Sbjct: 171 IKTSPQRRPSSMPSPASRQAV 191
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 4 KLVDPRAAGRTDLKSQLEGFNTSCLRDVDTNEKIVLPSAED 126
K VDP +Q EGFN + + D EK LP ED
Sbjct: 73 KGVDPEKLKFARGGTQWEGFNAPVILEGDVVEKGRLPGKED 113
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 115 SAEDVATEKTQKSLFDGIEKFDSSQL-KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENF 291
S E+ + E++++ +G + S+++ K +ET+ K P DKD E + ++ + E+
Sbjct: 690 SEEEESEEESEEDEEEGAKPSASAKIAKTSETENKVPKVDKDDEEDDDDEEEESEEDESN 749
Query: 292 DPTKLKHT 315
P+ + T
Sbjct: 750 KPSSRQVT 757
>SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22)
Length = 1296
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 164 PSNKDFWVFSVATSSADGSTIFSLVSTSRRQ 72
PSN VFSV SS++ ++I S SRR+
Sbjct: 988 PSNASSGVFSVQVSSSETNSIESSPHQSRRR 1018
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 70 SCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEA 249
S LR +D+N + + S D E +K L + + K + + LP++ A +
Sbjct: 1428 SPLRALDSNAECAVSSDSDSELEDEKKPLASFCSQVKMHKTKEQQCNVEKTLPEESAQKR 1487
Query: 250 EKEKNK 267
KN+
Sbjct: 1488 TFVKNR 1493
>SB_42524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 146 WVFSVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVRP 27
W+F V+ G I L TS + L + FR VRP
Sbjct: 13 WMFGVSVCRLQGFLILLLAWTSLHIMALTAVNRYFRVVRP 52
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 178 DSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLK 309
+S +K TE KN D + EK++ KF + + KLK
Sbjct: 177 ESQPVKETERNRKNSSSGDDDSDDEKQEEKFDQKMRDKVRNKLK 220
>SB_30608| Best HMM Match : RFX1_trans_act (HMM E-Value=3.1)
Length = 476
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 64 NTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQE-KNPLPDKDA 240
+T +RD +T I LP+++ VA K Q + G+ +S + T + + DK A
Sbjct: 270 DTVSIRDCETGVVIELPASQTVAPHKFQGKVQFGVTFPGTSSKSWSRTMDFPHKQQDKPA 329
Query: 241 IEAEKE 258
+++
Sbjct: 330 SRGQQD 335
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 55 EGFNTSCLRDVDTNEKIVLPSAEDVATEKT-QKSLFDGIEKFDSSQLKHTETQEKNPLPD 231
+ FN + L D D +K +P +DV +K + L G + Q + + Q+ P
Sbjct: 254 KSFNDASLYDADIVKKTSVPRPDDVTAKKVISRCLAMGKKSVVPVQAQDPQFQQAFMQPS 313
Query: 232 KDAIE 246
D+++
Sbjct: 314 MDSMQ 318
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 97 EKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFL 273
++++L + TE+ QK + I++ Q + E QE+ +D + +KE+ + L
Sbjct: 224 QQLLLEEKQKTVTEEQQKLIQAQIDEQRERQKRLQEEQERLQEKQEDFLRKQKEQQEQL 282
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 25.4 bits (53), Expect = 9.8
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +1
Query: 40 LKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 219
L SQLE L + + + PS+ A+ + KS+ K+D QLK Q K
Sbjct: 112 LTSQLENMENHNL----SPKHLKQPSSTSSASSASGKSITSITSKYDPCQLKREIIQAKT 167
Query: 220 PLP------DKDAIEAEKEKNKFLNGIENFD 294
+ +K ++E + +K F +EN D
Sbjct: 168 RVERLRSEMEKVSVEVQAKKEGF-RQLENVD 197
>SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 134 VATSSADGSTIFSLVSTSRRQLVL 63
+A S +DG +F + +TS QLVL
Sbjct: 991 LAFSRSDGDAVFLMKNTSNHQLVL 1014
>SB_40770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 25.4 bits (53), Expect = 9.8
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 7 LVDPRAAGRTDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFD-- 180
+V+ +G + L++ EG N S + V + + L AED+ TQ F F+
Sbjct: 227 IVETLKSGSSALRAIQEGMNASDVDKVLMDVEGTLEDAEDIQQSLTQVISFKHAAIFNHF 286
Query: 181 SSQLKHTETQEKNPLPDKDAIEAEKE 258
+ +L + ++ D + +E E E
Sbjct: 287 AERLGNKAISDQTGGDDMEELERELE 312
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 169 EKFDSSQLKHTETQEKNPLPDKDAIEA 249
E FDS LKH ++ N +P+ + +
Sbjct: 382 EDFDSYSLKHERVKQSNTVPNPSKVRS 408
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 159 RRYREV*FEPAEAHRDSGEEPASGQRCYRSGEGKEQIPERHRELRS 296
RR +E+ AE H+ EPA + + SGE E+ H E++S
Sbjct: 35 RREQEIIELKAELHKRDDLEPAGQRHRHDSGESFEE----HEEIKS 76
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 136 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 267
E QK + +EK + K E EK +KD +E +++K +
Sbjct: 345 EAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEE 388
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 DVDTNEKIVLPSAEDVAT--EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEK 255
++D ++ IV +++A + + L D E+ S+L+ T E+ ++ +EAE
Sbjct: 1797 ELDEDDTIVRVVEQEIAEAFDLSTDQLNDAAERL-LSELEETLKNEEEVEKEEARLEAEA 1855
Query: 256 EKNKFLNGIENF 291
+ +K G +NF
Sbjct: 1856 QADKSEEGKDNF 1867
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 159 RRYREV*FEPAEAHRDSGEEPASGQRCYRSGEGKEQIPERHRELRS 296
RR +E+ AE H+ EPA + + SGE E+ H E++S
Sbjct: 11 RREQEIIELKAELHKRDDLEPAGQRHRHDSGESFEE----HEEIKS 52
>SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 103 SFHWCRRHGDSWC*SLRADSSGLCDLQPGDPLV 5
+ H C GD S R D LQPGDPLV
Sbjct: 12 NIHLCGSFGDHSYLSTRVDRIEF--LQPGDPLV 42
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.307 0.127 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,288,826
Number of Sequences: 59808
Number of extensions: 178255
Number of successful extensions: 612
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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