Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0159
         (316 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   2.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   2.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   6.2  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 7   LVDPRAAGRTDLKSQLEGFNTSCLRDVD 90
           ++DP  AG T++      F   CL D+D
Sbjct: 54  VLDPWFAGSTNIGINKWRFLLQCLEDLD 81


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 220 GSSPESRCASAGSNQTSRYRRIKTSGSSQWRRLQ 119
           GSS +   +   S+ T +    K   SS WR+L+
Sbjct: 190 GSSGDDLSSEWDSDYTDKSNEKKIPKSSGWRKLR 223



 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 92  PMKRLCFRLLKTSPLR 139
           P +  CFRLL    LR
Sbjct: 267 PQEEACFRLLMNDILR 282


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 37  DLKSQLEGFNTSCLRDVDTNEKIV 108
           +LKS L    + C++++ T ++I+
Sbjct: 21  ELKSGLHTVQSVCMKEIGTAQQII 44


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 92  PMKRLCFRLLKTSPLR 139
           P +  CFRLL    LR
Sbjct: 182 PQEEACFRLLMNDILR 197


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 92  PMKRLCFRLLKTSPLR 139
           P +  CFRLL    LR
Sbjct: 501 PQEEACFRLLMNDILR 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.307    0.127    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,479
Number of Sequences: 438
Number of extensions: 1420
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.8 bits)