Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0156
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003141-9|AAM48550.1|   89|Caenorhabditis elegans Hypothetical ...    62   2e-10
U28412-9|AAK71403.2|  251|Caenorhabditis elegans Hypothetical pr...    33   0.094
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    32   0.22 
Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z74030-18|CAA98448.1|  494|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z73970-6|CAA98247.1|  494|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z48009-6|CAA88079.1|  329|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL132943-3|CAB81974.1|  345|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC006769-15|AAF60587.1|  337|Caenorhabditis elegans Serpentine r...    27   8.1  

>AF003141-9|AAM48550.1|   89|Caenorhabditis elegans Hypothetical
           protein W02D3.12 protein.
          Length = 89

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +3

Query: 291 GEVGGPKGPEPTRYGDWERKGRVSDF 368
           GEVGGP GPEPTRYGDWERKGRVSDF
Sbjct: 64  GEVGGPAGPEPTRYGDWERKGRVSDF 89


>U28412-9|AAK71403.2|  251|Caenorhabditis elegans Hypothetical
           protein T19C3.7 protein.
          Length = 251

 Score = 33.5 bits (73), Expect = 0.094
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 78  NNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRETTSITDLGEQT 233
           NN RI ++   + Q  IE EN  V+    K L E R+K RE  ++    E+T
Sbjct: 87  NNGRIDVAELPAGQRVIEVENNEVRDKYKKTLYEIRRKCRELQNLGAEDEET 138


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +1

Query: 124 RSKKKMKV*KNLSQNDYLSLEKN*EKLHQSLILVNKLQIPRKMLCLLGPTILTPTLVKLV 303
           +S+++ KV  NL     LSLE N EK H+S++ + +L++   ++ +L  T  T TL +L 
Sbjct: 664 KSQQRGKV--NLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKIL-KTRKTYTLAQLT 720

Query: 304 -----VPKGLNQPDMVIGKEKEEYLI 366
                + K L  P+  I KE+ ++LI
Sbjct: 721 MELVEILKPLFIPNRKIIKEQIDWLI 746


>Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical
           protein F54D5.5b protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 48  RKLRNKALKLNNARICLSHYYSQQPPIEKENESVKKPESK 167
           RKL++   + N+A+  + HY +Q   ++KE +  +K  S+
Sbjct: 274 RKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCYRKELSR 313


>Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical
           protein F54D5.5a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 48  RKLRNKALKLNNARICLSHYYSQQPPIEKENESVKKPESK 167
           RKL++   + N+A+  + HY +Q   ++KE +  +K  S+
Sbjct: 209 RKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCYRKELSR 248


>Z74030-18|CAA98448.1|  494|Caenorhabditis elegans Hypothetical
           protein D1054.15 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 48  RKLRNKALK-LNNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRE 200
           + L N+  K L  A+    H Y+Q PP+ +EN+S+ +   KR  E+   +++
Sbjct: 30  KALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIR-SMKRKHEYGNVIKK 80


>Z73970-6|CAA98247.1|  494|Caenorhabditis elegans Hypothetical
           protein D1054.15 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 48  RKLRNKALK-LNNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRE 200
           + L N+  K L  A+    H Y+Q PP+ +EN+S+ +   KR  E+   +++
Sbjct: 30  KALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIR-SMKRKHEYGNVIKK 80


>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
           protein T20G5.5 protein.
          Length = 1234

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 393 RTKHNFEFRNQILFLFFPNHHIWLV 319
           R  + F FR+  LFL  P+H  WL+
Sbjct: 126 RVVYVFMFRSLFLFLLHPSHQKWLL 150


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 114  QQPPIEKENESVKKPESKRLSEFRKKLRETTS-ITDLGEQTSNSKEDAL 257
            Q+P  E ++  V++  ++   E+RKK ++TT+ +T + +   + K + L
Sbjct: 1745 QRPEFECKDAKVERMNAQEYEEYRKKCKKTTTKVTKVIDSCDDVKVEEL 1793


>Z48009-6|CAA88079.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.8 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 177 QIIVLTQVFLHFHFLFRSVAVVSNNDL-NISLHYSILRPYF 58
           QIIVL  VF+ F F + ++ VV    +  +S  + +++ +F
Sbjct: 24  QIIVLIPVFITFIFTYYAIKVVQKKSIFELSTKFLLIQNFF 64


>AL132943-3|CAB81974.1|  345|Caenorhabditis elegans Hypothetical
           protein Y116F11B.6 protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 93  CLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRET-TSITDLGEQTSNSKE 248
           CL H+ + +  I ++ E++KK + K L +  K L+E+   + +  ++  N KE
Sbjct: 211 CLEHFENDKIRIIEDVENIKKQDVK-LKKIEKNLKESRKELKEAHQEYLNRKE 262


>AC006769-15|AAF60587.1|  337|Caenorhabditis elegans Serpentine
           receptor, class j protein19 protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 195 SIFF*TQIIVLTQVFLHFHFLFRSVAVVSNNDL-NISLHYSIL 70
           SI F    I  T   L+ HF+FR +++ SNN + N  + Y +L
Sbjct: 88  SIAFRCSFISGTYGILNIHFIFRYLSLKSNNIIKNYFMPYGLL 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,023,229
Number of Sequences: 27780
Number of extensions: 212260
Number of successful extensions: 765
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)