Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0153
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 71 2e-12
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 71 2e-12
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 71 2e-12
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 40 0.003
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 40 0.003
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 40 0.003
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 37 0.034
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 34 0.24
BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein. 29 5.1
BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein. 29 5.1
AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, ligh... 29 5.1
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 70.9 bits (166), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +1
Query: 160 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 339
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 340 VLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
+LR + LTTK SSF I R + +G +S
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLS 111
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 70.9 bits (166), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +1
Query: 160 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 339
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 340 VLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
+LR + LTTK SSF I R + +G +S
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLS 111
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 70.9 bits (166), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +1
Query: 160 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 339
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 340 VLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
+LR + LTTK SSF I R + +G +S
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLS 111
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 145 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 324
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 325 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
G + L A TKN +++++ +GA+++
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLN 121
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 145 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 324
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 325 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
G + L A TKN +++++ +GA+++
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLN 121
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 145 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 324
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 325 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVS 429
G + L A TKN +++++ +GA+++
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLN 121
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 36.7 bits (81), Expect = 0.034
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 175 QAAPAVKKDV-RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRS 351
QAA V +V + + L + VA+ D+G V + AGSRYE + G +H L
Sbjct: 46 QAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEH 105
Query: 352 AAGLTTKNISSFLIQRKLSQIGAYVS 429
A TK S ++ ++ +GA+++
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLN 131
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.24
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 175 QAAPAVKKDV-RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRS 351
QAA V +V + + L + VA+ D+G V + AGSRYE + G +H
Sbjct: 37 QAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFPEH 96
Query: 352 AAGLTTKNISSFLIQRKLSQIGAYVS 429
A TK S ++ ++ +GA+++
Sbjct: 97 MAFKGTKKRSQLDLELEIENMGAHLN 122
>BC046117-1|AAH46117.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 48 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKER 200
R D V+ + L L+ + E GI RR LYS C+D+ +R ER
Sbjct: 96 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER 146
>BC039074-1|AAH39074.1| 258|Homo sapiens DNALI1 protein protein.
Length = 258
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 48 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKER 200
R D V+ + L L+ + E GI RR LYS C+D+ +R ER
Sbjct: 96 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER 146
>AL034379-10|CAI20553.1| 280|Homo sapiens dynein, axonemal, light
intermediate chain 1 protein.
Length = 280
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 48 REDSVNHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKER 200
R D V+ + L L+ + E GI RR LYS C+D+ +R ER
Sbjct: 118 RMDVVHLQEQLDLKLQQRQARETGICPVRRELYSQCFDELIREVTINCAER 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,179,555
Number of Sequences: 237096
Number of extensions: 1053115
Number of successful extensions: 2057
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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