Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0153
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 48 3e-06
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 48 3e-06
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 48 3e-06
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 38 0.003
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 37 0.005
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 36 0.009
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 33 0.067
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 29 1.1
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 1.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 1.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 7.7
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 49.2 bits (112), Expect = 1e-06
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +1
Query: 223 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRK 402
L N V +D+ P+ + +AF+AGSRYE + GLSH +R+ G T+ +
Sbjct: 27 LGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWT 86
Query: 403 LSQIG 417
LSQ G
Sbjct: 87 LSQTG 91
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAA 357
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++R++
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSV 88
Query: 358 GLTTKNISSFLIQRKLSQIG 417
G N + +Q G
Sbjct: 89 GRDAPNFPGLALVWNTAQNG 108
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAA 357
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++R++
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSV 74
Query: 358 GLTTKNISSFLIQRKLSQIG 417
G N + +Q G
Sbjct: 75 GRDAPNFPGLALVWNTAQNG 94
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAA 357
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++R++
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSV 88
Query: 358 GLTTKNISSFLIQRKLSQIG 417
G N + +Q G
Sbjct: 89 GRDAPNFPGLALVWNTAQNG 108
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAA 357
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++R++
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSV 74
Query: 358 GLTTKNISSFLIQRKLSQIG 417
G N + +Q G
Sbjct: 75 GRDAPNFPGLALVWNTAQNG 94
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAA 357
AA +K + L N V + +N ++++ +AF+AGSRYE + GL H +R+
Sbjct: 11 AAIKTQKPTGSLKTKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVHHVRNFV 70
Query: 358 G 360
G
Sbjct: 71 G 71
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 37.1 bits (82), Expect = 0.005
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +1
Query: 115 MASKTLVAPFIRHVTIRGYAQAAPAVK-KDV-----RIQSSVLPNKTFVAALDNGSPVTR 276
MA + V+ +R A+ AV KDV + + + L N V DNGS
Sbjct: 1 MALRLAVSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATAT 60
Query: 277 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGA 420
V + + GSR+E + G++H L T +S ++ +L+ IGA
Sbjct: 61 VGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGA 108
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 217 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 396
+ LPN VA + G + + AGSRYE + G +H L A T + ++
Sbjct: 33 TTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPRRTRMGLE 92
Query: 397 RKLSQIGAYVS 429
++ IGA+++
Sbjct: 93 LEVENIGAHLN 103
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 33.5 bits (73), Expect = 0.067
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 103 KLTKMASKTLVAPFIRHVTIRGYAQAAP-AVKKDVRIQ---SSVLPNKTFVAALDNGSPV 270
KLT + SK L+ P H T + P VK +Q ++ LP + +V++ N P+
Sbjct: 1030 KLTVLESKKLIKPIKAHTTPTAASNTTPIPVKTTTTLQTTTATTLP-ENYVSSSTN-RPL 1087
Query: 271 TRVTIAFKAGSRYEPQAEL 327
T + I+ K GS P ++
Sbjct: 1088 TPIIISMKLGSTSSPSPQI 1106
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 63 NHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC 203
NH Y+L+ TY+ Q +RP++ DQ P + RC
Sbjct: 1006 NHLSNAAYFLERCPTYQRRFQPGQRPVFPYRDDQAQEPVPESAPNRC 1052
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 223 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS 384
LPN V D V +A ++G RYE G+S ++ A ++++ SS
Sbjct: 24 LPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSS 77
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 86 LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 223
LP + K L +W+ K ML ATP+LR + +K+L N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 86 LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 223
LP + K L +W+ K ML ATP+LR + +K+L N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 26.6 bits (56), Expect = 7.7
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 178 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPV---TRVTIAFKAGSRY 309
A PA KK+ ++ LPN TF L NG P+ R+T+ A Y
Sbjct: 5182 ALPADKKEFNVKVRGLPNPTFQWFL-NGIPIKLDDRITLDDMADGNY 5227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,898,119
Number of Sequences: 27780
Number of extensions: 167707
Number of successful extensions: 415
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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