Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0152
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    24   1.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    24   1.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    24   1.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   1.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.6  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   8.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   8.7  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 99  NNYNKHNYNKLYYN 112


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 332 NNYNKHNYNKLYYN 345


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 453 NNYRKHSRNKLLCN 494
           NNY KH+ NKL  N
Sbjct: 332 NNYNKHNYNKLYYN 345


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 701 LCYSEMCLIREILCKY 654
           + +SE CL  EILC +
Sbjct: 430 IAFSESCLPEEILCPH 445


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 543 SPIKNIYENN 514
           +PIKN+Y+NN
Sbjct: 31  TPIKNVYKNN 40


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 211  PIYYMELLTLPQHQNLPP 158
            P Y    +++PQ Q LPP
Sbjct: 1270 PAYSCGTVSVPQQQQLPP 1287


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 175 HQNLPPFFKSYSFCRTLSLIFRSLKL 98
           H + P  F  YSF   L+LIF S  L
Sbjct: 471 HNSSP--FSIYSFLERLNLIFMSSSL 494


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 175 HQNLPPFFKSYSFCRTLSLIFRSLKL 98
           H + P  F  YSF   L+LIF S  L
Sbjct: 509 HNSSP--FSIYSFLERLNLIFMSSSL 532


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +3

Query: 456 NYRKHSRNKLLCNFYSR---PINYFHR 527
           NY  ++  KL CN Y +    INY  +
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNINYIEQ 116


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +3

Query: 456 NYRKHSRNKLLCNFYSR---PINYFHR 527
           NY  ++  KL CN Y +    INY  +
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNINYIEQ 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,077
Number of Sequences: 438
Number of extensions: 3642
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)