Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0148
(596 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 52 5e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 44 7e-05
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 42 5e-04
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 41 9e-04
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 40 0.001
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 39 0.003
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 36 0.019
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.019
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 0.71
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 5.0
SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_52498| Best HMM Match : Chromate_transp (HMM E-Value=0.17) 27 8.7
SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_51576| Best HMM Match : UPAR_LY6 (HMM E-Value=2.5) 27 8.7
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 27 8.7
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 104 bits (249), Expect = 6e-23
Identities = 46/111 (41%), Positives = 72/111 (64%)
Frame = +1
Query: 259 LLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFV 438
++++ +++++ +V AL KDL + + E ++ E+ ND L L EW KP+ G V
Sbjct: 1 MVQLLDKHEDEIVAALKKDLCKPRQETVIAEILLAKNDAILALEKLSEWMKPQPVETGIV 60
Query: 439 NILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 591
N +D I N+P GV L+I AWNYP+QL+ LP+ GAIA GN ++KPSE++
Sbjct: 61 NKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVA 111
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +1
Query: 469 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 591
+P GVV IGAWNYP+Q +A AIA GNT++ KPS L+
Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLT 449
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/146 (26%), Positives = 68/146 (46%)
Frame = +1
Query: 145 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 324
+T++ +T +AV+ AR F + P R + L ++ R +++ ++ D +
Sbjct: 672 STTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGK 731
Query: 325 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAW 504
S E ++ N R+ H+ G+ ++D + P GVV I W
Sbjct: 732 SVRETRDCDIP---NVARHLYHHA-----------GWAQLMDTEMQGWKPVGVVGGIVPW 777
Query: 505 NYPLQLLLLPMAGAIAAGNTVIVKPS 582
N+PL LL + A+A GNTV++KP+
Sbjct: 778 NFPLMLLCWKVCPALAMGNTVVLKPA 803
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 391 YLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVI 570
+ D+ TKPE P + ++P GV+ + L + +A AI GNTV+
Sbjct: 1269 FSDKDTKPEETP-----FYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVV 1323
Query: 571 VKPSE 585
+ PSE
Sbjct: 1324 IVPSE 1328
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +1
Query: 439 NILDEVVIYN----DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 591
N L+ + N P GV +I WN PL LL +A A+A+G TV+ KPSE++
Sbjct: 131 NFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMT 185
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 466 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 585
++P G+V I WN+PL + + +A A+A GN VI+KP+E
Sbjct: 465 HEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAE 504
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 451 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 582
+V+I +P GV I WN+P+ +L+ + AIA G T+I +PS
Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPS 117
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 466 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 585
++P GVV I WN+PL + L +A A+A G VI+KP+E
Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAE 1374
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +1
Query: 172 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 351
A A ++A D +P+E R++ L N + E+N ++ E D +S + A ++
Sbjct: 86 AVMAARQAFDDSPWSRIKPVE-RQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVD 144
Query: 352 VDYLINDLRNTLHYLDEWTKPE-HPPKGFVNILDEVVIYN----DPYGVVLVIGAWNYPL 516
+ ++ LR + TK E + V + + + + GVV I AWN+PL
Sbjct: 145 IRLAVDFLRYMAGFA---TKIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPL 201
Query: 517 QLLLLPMAGAIAAGNTVIVKPSE 585
L + A+A G T ++KP+E
Sbjct: 202 LLACWKLGPALATGCTTVLKPAE 224
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 484 VLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 585
+L WN+PL ++ A A+AAG TVI+KPSE
Sbjct: 143 LLTTEQWNFPLGMITRKAAAALAAGCTVIIKPSE 176
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +1
Query: 67 VSIQIDKVRGSNKSEXXXXXXXXXXLTTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQ 246
+ +++D ++G ++ E ++ + + A DT +RG +E ++
Sbjct: 97 LQLELDIMKGEHEMEITMLKKEIQAERVRLEQRKAKLDVADDASDTSSRGPYPAVEAIQE 156
Query: 247 QLKNLLRMYEENQNVMVEALHKDLRRS-----KMEAILLEVDYLINDLRNTLHYLDEWTK 411
Q+ +L YEE + E L + + R+ K E + +N+L+NT E +
Sbjct: 157 QMSSLQANYEEEIQTVKEQLQEQMLRANEAVEKYEQQEYQFHENLNELKNTFAQEQEMMR 216
Query: 412 PEH 420
EH
Sbjct: 217 EEH 219
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 451 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 582
E+ +P GVV +I WN+P +A A+A GN ++ KP+
Sbjct: 134 EIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPA 177
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 478 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 591
GVV +I +W+ L +L + A+A+GN V++KPS L+
Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLA 190
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 145 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 324
TT ++T+ E K + F +G +E RRQ L++ L+ +E + A + +R
Sbjct: 81 TTDDKRTIFTFE--DKRKQNFEKGRLE-LEKRRQDLQDKLKREKEEREAKERAEEERRQR 137
Query: 325 SKMEA 339
+KMEA
Sbjct: 138 AKMEA 142
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 151 SKQKTMSAAEAVQKARDTFNR--GTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 324
+K+ ++A + ++ N+ GT IE++R+ L+ E +N+ A K L+
Sbjct: 57 NKRTALNALKRKKRLEKQLNQIDGTLSTIEFQREALEGANTNTEVLKNMSYAA--KALKA 114
Query: 325 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDE 453
+ + + +V +++D++ DE ++ P GF +DE
Sbjct: 115 AHQQLDVDDVHDMMDDIQEQTELADEISRAISEPAGFGMDIDE 157
>SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 MYEENQNVMVEALHKDLRRSK--MEAILLEVDYLINDLRNTLHYLDEWTKPEHPPK 429
+Y E + KDL S + ++++ YL ++ + + DEW K E PPK
Sbjct: 68 LYAERLRLKPTTSSKDLSSSDVFLISVMVASKYLYDEGEDEEVFNDEWAKAEDPPK 123
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 585 FAGFHDNRVPGSDGSGHRQKQQ 520
F +NR PG+DG G R K Q
Sbjct: 474 FPSLKENREPGADGKGKRSKTQ 495
>SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 196 ELFGRPQQLTSSFVWML*DSRFHSSYCCFHFYYFRALY--RFVCSH 65
EL + QQ F+W+ S HSS+ +YY +L RFV S+
Sbjct: 263 ELKRKQQQEVDIFIWLDHSSCDHSSFTLIGYYYSVSLQIDRFVSSN 308
>SB_52498| Best HMM Match : Chromate_transp (HMM E-Value=0.17)
Length = 655
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 376 RNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLV 492
++ ++ L+E P P K F N+ DE++ N+ YG +++
Sbjct: 501 KDFIYTLNEKGVPRIPIKLFQNVCDEILPRNEAYGKMVL 539
>SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 231 RMAPSAAQEFVKNVRGKPKRHGGGPTQGSQTKQNGSHSTRS 353
R P AA ++V K +R P GS++ + S STR+
Sbjct: 878 RTQPQAASHVYRSVMIKNRRRAPIPNTGSESSRGDSGSTRT 918
>SB_51576| Best HMM Match : UPAR_LY6 (HMM E-Value=2.5)
Length = 204
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 451 RLECSRSLLEDVPA*STHPNNAECSSNH 368
RL+C R +L D+ H N EC+ +H
Sbjct: 46 RLQCWRRVLHDLSGEHQHVLNKECTKSH 73
>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
Length = 1706
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 217 TTRPIEWRRQQLKNLLRMYEENQNVMV 297
+TRP+ WR + +LLR Y E + V +
Sbjct: 1491 STRPLTWRDSFVLDLLRKYRERRYVNI 1517
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,963,802
Number of Sequences: 59808
Number of extensions: 364536
Number of successful extensions: 1134
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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