Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0147
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 30 1.5
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 30 2.0
SB_58915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 29 4.5
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_6219| Best HMM Match : REJ (HMM E-Value=8.1) 28 6.0
SB_41881| Best HMM Match : Extensin_1 (HMM E-Value=5.5) 28 7.9
SB_33072| Best HMM Match : Arm (HMM E-Value=0.00043) 28 7.9
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 28 7.9
SB_51327| Best HMM Match : DMA (HMM E-Value=0.00024) 28 7.9
SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 28 7.9
SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13) 28 7.9
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 7.9
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29) 28 7.9
>SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 410 SEDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYR 589
SE +E P+ ER+ KG E++R + T+ R+R P R S R + +
Sbjct: 370 SERVRESPRGYERVRKGKRESERVRESPKGVLEGTRESERVRESP-RGSERVREGKRESE 428
Query: 590 RSRAGHK 610
R R G +
Sbjct: 429 RVREGKR 435
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = +1
Query: 241 WTWCPRWCRKQTWAPWIWCKKARVVRGVK----ASSHHDDCQIHA*KVH---SVWTCIES 399
W+ C R C T + C A V ++ S D C IHA VH S WT
Sbjct: 571 WSECTRSCSNGTRSRTRICLDANVTTALRNCSGGSKEVDTCNIHACPVHGGWSEWTTWSP 630
Query: 400 CSL 408
CS+
Sbjct: 631 CSV 633
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 387 LHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQ 512
L ++++ QR + +L QK E E+ + + K+KQ+ Q++EQ+
Sbjct: 968 LRKKIMKEQRELEKMLQQK-EKERQVERQKQKQLQEQLQEQE 1008
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +2
Query: 413 EDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYRR 592
++R+ +S +R+ K + E R+ + R+RP R S + R + D RR
Sbjct: 1025 KERQSHSESPQRVTKSSKERPRKRPRHQSRERRPSSSPPRRSRPQRTSPSPRRTPEDRRR 1084
Query: 593 SRAGHK 610
SR +
Sbjct: 1085 SRGSRR 1090
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 331 RLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST 203
RL L P +P CT ST ++ ++ T STP P ST ST
Sbjct: 6 RLKLSTPSTP-CTPSTPSTPSTPSTPRTPSTPSTPCTPSTPST 47
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 325 SLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST 203
S P+ S CT ST ++ ++ T STP P ST ST
Sbjct: 70 STPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPST 110
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 321 SPHHSRLLAPYPRRPGLLPTPAWTPGPRRRHHL--ERPQIA 205
S H SR L+PY ++ P+P WT R R + RP+++
Sbjct: 278 SRHRSRSLSPYRKKYSRSPSPYWTSVNRVRSPIRPSRPRVS 318
>SB_58915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 313 PLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST*YATG*RKMYVFI 164
P +PS T++T P T+ PPPPL S D++ A+ +K ++F+
Sbjct: 137 PNTPSQTLATTPTAPMVTTPAPPPPPPPPLIPS-DTSAEASDDKKYWMFL 185
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 410 SEDRKECPKSKERIGKGAIETQREADIESNAGTATQG 520
+++R+ K KER+ KG+IE + A E G QG
Sbjct: 109 NKERERVNKKKERLNKGSIEQGKRA-TEQGKGATEQG 144
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 324 HSPHHS-RLLAPYPRRPGLLPTPAWTPGPR 238
H PH LLAP PG LPTP+ G R
Sbjct: 2395 HHPHSQPSLLAPLITVPGQLPTPSQPQGTR 2424
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 288 PRRPGLLPTPAWTPGPRRRHHLERPQIARDTRLVKEKCTFLS 163
P P PTP+ P + H P ++ DT + TFLS
Sbjct: 230 PTAPSYPPTPSSYPPTQPSHPPTAPFLSSDTTFLSSDTTFLS 271
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 315 HHSRLLAPYPRRPGLLPTPAWTPGPR 238
H S+ L P PRRP P P +TP PR
Sbjct: 136 HTSQPLRPTPRRPSDTPQP-FTPPPR 160
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +2
Query: 410 SEDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYR 589
+E E P+S RIG+G + S AG R + +P R + A R
Sbjct: 1289 AERSTERPRSANRIGRGVRGASGGRALRSPAGRGFGRQRREQEKPPRFQKQQERAAAQQR 1348
Query: 590 RSRAGHKPDFARDT 631
G RDT
Sbjct: 1349 GLGRGRSRGIGRDT 1362
>SB_10667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 68 RKNTRLADNTTNPRADSCSPGD 3
RK TR+ + T ++SCSPGD
Sbjct: 51 RKTTRMRNRITRGGSNSCSPGD 72
>SB_6219| Best HMM Match : REJ (HMM E-Value=8.1)
Length = 576
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 351 PNPCLESPQRMDLHRELLFNQRIGKNV 431
PNPC+ SPQ + H++ N+ + +V
Sbjct: 394 PNPCISSPQSKNSHQDKENNRNMASSV 420
>SB_41881| Best HMM Match : Extensin_1 (HMM E-Value=5.5)
Length = 180
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -1
Query: 93 KTRGPNRFTQKHASGRQHNQS----SCRFLQPGGS 1
K+R N+FT GR QS S FLQPGGS
Sbjct: 31 KSRNLNKFTLNVRQGRDVFQSIRDKSIEFLQPGGS 65
>SB_33072| Best HMM Match : Arm (HMM E-Value=0.00043)
Length = 701
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 303 LLAPYPRRPGLLPTPAWTPGP 241
+L+P P+ PG+ P P+ TP P
Sbjct: 177 ILSPLPQSPGVQPRPSVTPCP 197
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 318 PHHSRLLAPYPRRPGLLPTPAW--TPGPRRRHHLERPQIA 205
PH P P PTP + TP P RHHL P A
Sbjct: 5 PHPLLRHHPPPPASSSSPTPCYGITPHPLHRHHLPPPATA 44
>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 245 PGVHAGV-GSKPGRRGYGA 298
PG H GV G+K G RGYG+
Sbjct: 174 PGNHTGVHGAKQGHRGYGS 192
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 396 ELLFNQRIGKNVLNQKSELEKALSKHKE----KQILNQMREQQHKD 521
E+L I + Q + +E+ L + E KQI N R+QQHK+
Sbjct: 173 EILDEAAIDEESSAQAAAIERKLKEESESQRVKQITNHTRDQQHKE 218
>SB_51327| Best HMM Match : DMA (HMM E-Value=0.00024)
Length = 236
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 279 PGLLPTPAWTPGPRRRHHLERP-QIARDTRLV 187
P + TPA+ G HH ERP RDT +V
Sbjct: 159 PQSMSTPAYEDGASNSHHTERPLDGERDTAVV 190
>SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 307 SPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST 203
SP+ + ST + TSV T ST PP S +T
Sbjct: 56 SPTSSTSTTQHQVTTTSVSTPSTTTPPRTTSISTT 90
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 349 SRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPPLRASTDST 203
+R + SLP P PS + T+ +S ++S PPPP +S S+
Sbjct: 86 TRSSSSSQSLPPP--PSLSSQTSSSSPPPSSSSSQSLPPPPSSSSQPSS 132
>SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13)
Length = 661
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 335 DEAFTPRTTLAFLHHIHGAQV 273
DE TPRTTL F++ + GA V
Sbjct: 148 DEKLTPRTTLFFVYLLFGAAV 168
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 476 READIESNAGTATQGCARIRTRPDRASSATRTSRADYRRSRAGHKP 613
R ADIE + + ++ R ++R + S++ R + DY S +P
Sbjct: 667 RHADIEKSISSCSEIGKRKKSRSSKQSASPRAKKQDYSTSSEESEP 712
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -1
Query: 327 FHSPHHSR-----LLAPYPRR--PGLLPTPAWTPGPRRRHHL 223
+ SPH R PYP PG +P P W P P HH+
Sbjct: 865 YGSPHRQRPPYPVQQPPYPVNGMPGAMPMPPWIP-PYNAHHV 905
>SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)
Length = 1239
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/77 (23%), Positives = 30/77 (38%)
Frame = +2
Query: 443 ERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYRRSRAGHKPDFA 622
E G + + E D + ++ + +T R S TRT + S A D
Sbjct: 192 ENDGPSKVNGEVETDGSKISSGPSRASSGRKTSSGRKISGTRTPGVGSKESAAAGAVDEV 251
Query: 623 RDTSALETCGSSRAHTG 673
+A + C +R H+G
Sbjct: 252 DFANAFQECPEARIHSG 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,611,188
Number of Sequences: 59808
Number of extensions: 443477
Number of successful extensions: 2080
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2073
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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