Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0147
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical...    31   0.99 
AL132860-15|CAB60499.1|  512|Caenorhabditis elegans Hypothetical...    31   0.99 
U80444-11|AAB37793.2|  304|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.      28   5.3  
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge...    28   5.3  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    27   9.2  
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    27   9.2  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical
           protein Y56A3A.17b protein.
          Length = 497

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -3

Query: 352 GSRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPP 230
           G+ +  +  ++ A  SP+ T+++ P+F  D SV T+ TP P
Sbjct: 104 GTPKNPLNSTVFAASSPAATVASVPKF-GDISVITKETPAP 143


>AL132860-15|CAB60499.1|  512|Caenorhabditis elegans Hypothetical
           protein Y56A3A.17a protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -3

Query: 352 GSRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPP 230
           G+ +  +  ++ A  SP+ T+++ P+F  D SV T+ TP P
Sbjct: 104 GTPKNPLNSTVFAASSPAATVASVPKF-GDISVITKETPAP 143


>U80444-11|AAB37793.2|  304|Caenorhabditis elegans Hypothetical
           protein F26B1.1 protein.
          Length = 304

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +2

Query: 425 ECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRADYRRSRAG 604
           EC K K++  K   +TQ+E D +S +    +  AR++ +  R S        D   S++ 
Sbjct: 43  ECAKKKKKESKKRKKTQKEEDCDSESIKQKKKKARVKKKEVRKSKKDVEDDEDDSNSKSA 102

Query: 605 HK 610
            K
Sbjct: 103 KK 104


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 332 EAFTPRTTLAFLHHIHGAQVCFRHQRGH 249
           E    +T  A   H HG   C  H++GH
Sbjct: 86  ETIVSKTNFAISSHYHGPHTCRVHKKGH 113


>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
          Length = 1359

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +2

Query: 410 SEDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRAD 583
           SED KE  KSK++  K  ++ + E++ E+     T+   R +T  + +S + ++   +
Sbjct: 212 SEDEKEVKKSKKK-SKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEE 268


>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
           related protein 1 protein.
          Length = 1359

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +2

Query: 410 SEDRKECPKSKERIGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRAD 583
           SED KE  KSK++  K  ++ + E++ E+     T+   R +T  + +S + ++   +
Sbjct: 212 SEDEKEVKKSKKK-SKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEE 268


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -3

Query: 304  PSCTISTAPRFAS--DTSVDTRSTPPPPLRAST 212
            P+   ST P + +  DTS +T +T  PP+R ST
Sbjct: 2788 PTTATSTEPIYTASPDTSPETEATIGPPIRIST 2820


>Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical
           protein C11G6.3 protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 319 PAPLSPSCTISTAPRFASDTSVDTRSTPPPP 227
           P P+ P  T S+  R AS  S      PPPP
Sbjct: 35  PEPMRPDTTTSSGSRPASSKSNYHNEPPPPP 65


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +1

Query: 256  RWCRKQTWAP--WIWCKKARVVRGVK 327
            R CR  TW+P  W WC+   +   +K
Sbjct: 1221 RVCRNGTWSPGWWAWCRDRNLEYALK 1246


>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = +2

Query: 155 EKSDKNVHFSLTSRVSRAICGRSKWWRRRGPGVHAGVGSKPGRRGYGARRREWCGE*KPH 334
           EK  K  H    SR  R   G S    +RG G  A    +  RR +G+  R    E +PH
Sbjct: 311 EKGRKQEHKE--SRDRRPARGDSGEVEKRGRGEKAEGRDEQERRSHGSEERRGGSEEQPH 368

Query: 335 R 337
           R
Sbjct: 369 R 369


>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
 Frame = +2

Query: 413 EDRKECPKSKER----IGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRA 580
           E   E P+S  R    + +  +E+Q+      N+  A+   ++ +  P   S      R 
Sbjct: 140 EKEDEAPQSSRRESTRLKRKLLESQKTVQTTGNSSRASSK-SQEKEVPGTKSQCAPKIRT 198

Query: 581 DYRRSRAGHKPDFARDTSALETCGSSRAHT 670
              +S+A  K   +    A  TCGSS + T
Sbjct: 199 TPEQSKAATKRQSSTTVRASSTCGSSVSST 228


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
 Frame = +2

Query: 413 EDRKECPKSKER----IGKGAIETQREADIESNAGTATQGCARIRTRPDRASSATRTSRA 580
           E   E P+S  R    + +  +E+Q+      N+  A+   ++ +  P   S      R 
Sbjct: 140 EKEDEAPQSSRRESTRLKRKLLESQKTVQTTGNSSRASSK-SQEKEVPGTKSQCAPKIRT 198

Query: 581 DYRRSRAGHKPDFARDTSALETCGSSRAHT 670
              +S+A  K   +    A  TCGSS + T
Sbjct: 199 TPEQSKAATKRQSSTTVRASSTCGSSVSST 228


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -3

Query: 325 SLPAPLSPSCTISTAPRFASDTSVDTRSTPP 233
           S P+P SPS    T PR A   SV   S  P
Sbjct: 394 SAPSPASPSSVSVTIPRVALPASVSVPSPSP 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,033
Number of Sequences: 27780
Number of extensions: 319410
Number of successful extensions: 1326
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)