Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0147
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      34   0.001
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.7  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.7  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.7  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 330 GFHSPHHSRLLAPYPRRPGLLPTPAWTPGPRR-RHHLERPQIARDTR 193
           G H P H +L+  +P R G LPTP  TP P   +  L R QI R+ R
Sbjct: 137 GNHLPFHEKLVESFP-RGGSLPTPV-TPTPTTVQQLLRRAQIRRNER 181


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 293 HIHGAQVCFRHQRGH 249
           H H AQ+ + HQ+ H
Sbjct: 796 HQHAAQMIYGHQQSH 810


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 414 RIGKNVLNQKSELEKALSKHKEKQILNQMREQQHKDA 524
           +IGK V  + SEL ++  +H  +++L  + + +  DA
Sbjct: 254 KIGKMVNQKFSELIQSKPQHARRKVLAGIVQTKGSDA 290


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 566 RTSRADYRRSRAGHKPDFARDTS 634
           RTSR  Y RSR   K  +  + S
Sbjct: 33  RTSRKRYSRSREREKKSYKNENS 55


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 566 RTSRADYRRSRAGHKPDFARDTS 634
           RTSR  Y RSR   K  +  + S
Sbjct: 33  RTSRKRYSRSREREKKSYKNENS 55


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 566 RTSRADYRRSRAGHKPDFARDTS 634
           RTSR  Y RSR   K  +  + S
Sbjct: 33  RTSRKRYSRSREREKKSYKNENS 55


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 566 RTSRADYRRSRAGHKPDFARDTS 634
           RTSR  Y RSR   K  +  + S
Sbjct: 33  RTSRKRYSRSREREKKSYKNENS 55


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 566 RTSRADYRRSRAGHKPDFARDTS 634
           RTSR  Y RSR   K  +  + S
Sbjct: 266 RTSRKRYSRSREREKKSYKNENS 288


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 294  PYPRRPGLLPTPAWTPGPRRR 232
            P P RP  +PT   +P P  R
Sbjct: 1364 PVPERPERVPTVDLSPSPSDR 1384


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = -3

Query: 373 GLSKHGFGSRRGAMRLSLPAPLSPSCTISTAPRFASDTSVDTRSTPPPP 227
           G S  G G   G +   +    S +   +  P   + TS    +TP PP
Sbjct: 7   GGSSAGVGVVGGTIASVVAGAASLTLVKAETPEHLAGTSTTAAATPTPP 55


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/49 (20%), Positives = 26/49 (53%)
 Frame = +3

Query: 366 ESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQ 512
           E  Q+M   ++    Q+  ++V+N +   ++   + +++Q   Q ++QQ
Sbjct: 413 EQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQ 461


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 289 STAPRFASDTSVDTRSTPP 233
           S  PR AS  S  T S+PP
Sbjct: 512 SPNPRIASAPSSSTSSSPP 530


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 33 SSCRFLQPGGS 1
          + C FL PGGS
Sbjct: 66 AKCEFLNPGGS 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,045
Number of Sequences: 438
Number of extensions: 3977
Number of successful extensions: 40
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)