Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0145
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1790|AAN10726.1|  579|Drosophila melanogaster CG31720-P...    29   4.1  
AY058329-1|AAL13558.1|  742|Drosophila melanogaster GH10201p pro...    29   7.1  
AE014298-1360|AAF46515.1|  742|Drosophila melanogaster CG3106-PA...    29   7.1  

>AE014134-1790|AAN10726.1|  579|Drosophila melanogaster CG31720-PA
           protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 455 LFVLSLFYTKA*VLYLSIEALRSLPGQ-LVCNIN 553
           L +   FY    ++Y+SI  LR+LPG+ L+C ++
Sbjct: 380 LLISCCFYALTLIVYISIAKLRNLPGKILICLVS 413


>AY058329-1|AAL13558.1|  742|Drosophila melanogaster GH10201p
           protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +3

Query: 540 YVI*ICHNARDRML*SYI---FFTAYSRVCYC 626
           +++  C+N    ++  ++   FFT +SR+CYC
Sbjct: 593 WIVWACYNGHGGLVNDFLSWGFFTGFSRLCYC 624


>AE014298-1360|AAF46515.1|  742|Drosophila melanogaster CG3106-PA
           protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +3

Query: 540 YVI*ICHNARDRML*SYI---FFTAYSRVCYC 626
           +++  C+N    ++  ++   FFT +SR+CYC
Sbjct: 593 WIVWACYNGHGGLVNDFLSWGFFTGFSRLCYC 624


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,216,546
Number of Sequences: 53049
Number of extensions: 503937
Number of successful extensions: 831
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)