Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0145
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical
           protein F25C8.1 protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 502 ID*GTTKSAGSASM*YKFVTTPAIECYKVTFFLQLIHV 615
           ID    K AG A   YK +    IE  K T+FLQL+HV
Sbjct: 69  IDNSVRKLAGMAKN-YKMIDLTNIE--KTTYFLQLVHV 103


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 389 LELNKNNNFVFPLMCPPSDGFLLFVLSLFY 478
           + L  NNNF  PL C P D    F +S  Y
Sbjct: 24  IPLTSNNNFNQPLTCTPQDPCSCFSVSARY 53


>AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical
           protein Y105C5B.4 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 103 LLWIKTDQRHRYVYWLLIEKS 41
           LLWI +D   +YVYW +  KS
Sbjct: 291 LLWIFSDSLRKYVYWKMGIKS 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,989,098
Number of Sequences: 27780
Number of extensions: 282694
Number of successful extensions: 535
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)