Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0144
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.38 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   0.67 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   2.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 94  IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 189
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 293 RCTRPVVPPVS-CWTPATVSPTPYPSTRDTH 382
           R  R VVPP   C  P+T+ P P     D++
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSN 225


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 299 TRPVVPPVSCWTPATVSPTPY 361
           T  + P ++CW+  +  P PY
Sbjct: 314 TTVMSPTINCWSLTSSPPPPY 334


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 122 FSMSSQLVTIPCSMGYLRVRYLFCSASC 39
           F   SQ +    S G++ +R+L    SC
Sbjct: 382 FGAESQTINFMFSFGFILLRFLSVFESC 409


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 13  SGSPGCRNRHEAEQKRYLT 69
           SG+   R +HE  + RYLT
Sbjct: 236 SGAQLARLKHEFAENRYLT 254


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 MPNLLHVIPVSDDSVFD 82
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 MPNLLHVIPVSDDSVFD 82
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 MPNLLHVIPVSDDSVFD 82
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 MPNLLHVIPVSDDSVFD 82
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
 Frame = -2

Query: 410  SPDAGWREXSA--YPS*MGTVWETPSPESSTIP 318
            S    W   S   YP    T W  P P +S  P
Sbjct: 1353 STTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 34   SCSPGIHY 11
            +C+PG+HY
Sbjct: 1233 NCAPGLHY 1240


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 401 AGWREXSAYPS*MGTVWETPSPESSTIPV 315
           A W   S YP   G  + +P P  S +P+
Sbjct: 186 ASWHTPSMYPLSPGAGFRSPYP--SALPI 212


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 401 AGWREXSAYPS*MGTVWETPSPESSTIPV 315
           A W   S YP   G  + +P P  S +P+
Sbjct: 78  ASWHTPSMYPLSPGAGFRSPYP--SALPI 104


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -2

Query: 239 MIWVIFSLLALG 204
           ++WV+F+++ LG
Sbjct: 52  VLWVLFTMIVLG 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,110
Number of Sequences: 336
Number of extensions: 2610
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)