Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0144
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.1  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   5.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   7.2  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   9.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   9.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 151  LRVAPEEHPVLLTEAPLNPKANREKM 228
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = +1

Query: 325 VLDSGDGV--SHTVPIYEGYALXS-RHPASGLGRSRPHRLPHEDPHRARLLVHYH 480
           VLD  D    SH   +   Y+     H   G G S  H  PH     A    H H
Sbjct: 390 VLDLEDNALASHNNLLNNVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 1   GALNSGSPGCRNRHEAEQKRYLTL 72
           G +N+ + GC N H+  Q++ + +
Sbjct: 321 GLVNNSAIGCWNEHQPLQRQNMDM 344


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   GALNSGSPGCRNRHEAEQKRYLTL 72
           G +N+ + GC N H+  Q+  + +
Sbjct: 321 GLMNNSAIGCWNEHQPLQRENMDM 344


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 354 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 262
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 1   GALNSGSPGCRNRHEAEQKRYLTL 72
           G + + + GC N H++ Q++ L +
Sbjct: 318 GLVGNSAVGCWNEHQSLQRQNLEM 341


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +1

Query: 391 RHPASGLGRSRPHRLPHEDPHRARLLVHYHRRAGN 495
           R P +  G +RP  +P   P   RL        GN
Sbjct: 118 REPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGN 152


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 303 RVQREHGLDGDVHGG 259
           RV  ++G+ GD +GG
Sbjct: 63  RVYDKNGMTGDAYGG 77


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 299 YSESTAWMATYMAGVLNVSNMIWVIFSLLALGLRGAS 189
           + E    +   M   LN+SN+ W+        L GA+
Sbjct: 17  FPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGAN 53


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 80  GYLRVRYLFCSASCRFLQPGDPLF 9
           G+  + Y  CS   R +  G+PL+
Sbjct: 926 GFGPIHYGVCSNYLREISDGEPLY 949


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,615
Number of Sequences: 438
Number of extensions: 3117
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)