Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0144
(501 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 235 2e-62
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 234 2e-62
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 234 2e-62
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 233 7e-62
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 232 1e-61
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 232 1e-61
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 229 6e-61
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 229 6e-61
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 229 6e-61
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 214 3e-56
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 198 2e-51
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 197 4e-51
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 148 2e-36
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 122 1e-28
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 110 4e-25
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 86 1e-17
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 64 5e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 59 1e-09
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 45 3e-05
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 45 3e-05
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 35 0.035
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.11
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.11
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 32 0.19
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 32 0.19
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 32 0.25
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 31 0.44
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 0.44
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.58
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.58
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 30 0.76
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 30 0.76
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 30 0.76
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 30 0.76
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 0.76
At3g28790.1 68416.m03593 expressed protein 30 1.0
At1g32190.1 68414.m03959 expressed protein 30 1.0
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 1.3
At1g10620.1 68414.m01204 protein kinase family protein contains ... 29 1.8
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 2.3
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 29 2.3
At4g21350.1 68417.m03084 U-box domain-containing protein similar... 29 2.3
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 2.3
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 2.3
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 2.3
At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family... 28 3.1
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 4.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 4.1
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 28 4.1
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 27 5.4
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 27 5.4
At1g61080.1 68414.m06877 proline-rich family protein 27 5.4
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 5.4
At2g35700.1 68415.m04378 AP2 domain-containing transcription fac... 27 7.1
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 27 7.1
At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.4
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 9.4
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 27 9.4
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 27 9.4
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 27 9.4
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 27 9.4
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 27 9.4
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 27 9.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 235 bits (574), Expect = 2e-62
Identities = 110/115 (95%), Positives = 112/115 (97%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 76.6 bits (180), Expect = 9e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIV
Sbjct: 175 HAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIV 211
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 234 bits (573), Expect = 2e-62
Identities = 110/115 (95%), Positives = 111/115 (96%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 234 bits (573), Expect = 2e-62
Identities = 110/115 (95%), Positives = 111/115 (96%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 233 bits (569), Expect = 7e-62
Identities = 109/115 (94%), Positives = 111/115 (96%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 72.5 bits (170), Expect = 1e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTD LMKILTERGY FTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIV 211
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 232 bits (567), Expect = 1e-61
Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 232 bits (567), Expect = 1e-61
Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 229 bits (561), Expect = 6e-61
Identities = 105/115 (91%), Positives = 112/115 (97%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++L
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 229 bits (561), Expect = 6e-61
Identities = 105/115 (91%), Positives = 112/115 (97%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++L
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 229 bits (561), Expect = 6e-61
Identities = 105/115 (91%), Positives = 112/115 (97%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ KR LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++L
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSL 173
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 175 HAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 214 bits (522), Expect = 3e-56
Identities = 96/115 (83%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
Frame = +1
Query: 43 EAEQKR-YLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 219
EA+ +R L+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NR
Sbjct: 60 EAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119
Query: 220 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
EKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYAL
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYAL 174
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIV
Sbjct: 176 HAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIV 212
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 198 bits (482), Expect = 2e-51
Identities = 88/107 (82%), Positives = 99/107 (92%)
Frame = +1
Query: 64 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 243
LTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMF
Sbjct: 56 LTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMF 115
Query: 244 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
E+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYAL
Sbjct: 116 ESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYAL 162
Score = 66.9 bits (156), Expect = 7e-12
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
H ILRLDL GRDLTDYL++I+TERGY++TT+AEREIV
Sbjct: 164 HGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIV 200
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 197 bits (480), Expect = 4e-51
Identities = 88/107 (82%), Positives = 99/107 (92%)
Frame = +1
Query: 64 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 243
LTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 244 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 384
ETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG AL
Sbjct: 82 ETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSAL 128
Score = 56.0 bits (129), Expect = 1e-08
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
HAILRLDLAGR LT+YLMKI+ ERGY T+AERE+V
Sbjct: 130 HAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVV 163
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 148 bits (358), Expect = 2e-36
Identities = 60/112 (53%), Positives = 83/112 (74%)
Frame = +1
Query: 46 AEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 225
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 226 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 381
M + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYS 171
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 499
H R+++AGR +T YL+ +L+ RGY+ TA+ E V
Sbjct: 174 HLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETV 210
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 122 bits (294), Expect = 1e-28
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 5/112 (4%)
Frame = +1
Query: 70 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 249
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 250 FNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALXS 390
FN P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + S
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGS 197
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 110 bits (265), Expect = 4e-25
Identities = 48/121 (39%), Positives = 78/121 (64%)
Frame = +1
Query: 52 QKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 231
++ ++ + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 232 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALXSRHPASGL 411
++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L +S L
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPL 204
Query: 412 G 414
G
Sbjct: 205 G 205
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 85.8 bits (203), Expect = 1e-17
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +1
Query: 79 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 255
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 256 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 375
Y + QAVLSLYA GR +G +D G G P+ EG
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG 156
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 64.1 bits (149), Expect = 5e-11
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Frame = +1
Query: 70 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 249
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 250 FNTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYAL 384
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTL 175
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 389 HAILRLDLAGRDLTDYLMKILTER 460
HAI R+DL G+ T+YL ++++ R
Sbjct: 177 HAIKRIDLGGKAFTNYLKELVSYR 200
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 2e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 79 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 225
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 59.3 bits (137), Expect = 1e-09
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +1
Query: 79 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 255
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 256 TPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALXSRHPASGLG 414
PA+ + A S L+ + GIVL G +H++P +G + + +G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIG 202
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +1
Query: 136 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 285
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 286 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 375
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +1
Query: 136 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 285
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 286 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 375
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 34.7 bits (76), Expect = 0.035
Identities = 28/87 (32%), Positives = 32/87 (36%)
Frame = +2
Query: 134 IPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 313
IPST S+ SPP P S H T P SPS P + P
Sbjct: 81 IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPT--PKKSPSPPPTPSLPPPA 138
Query: 314 PPVSCWTPATVSPTPYPSTRDTHSXHA 394
P S TP+ PTP S S H+
Sbjct: 139 PKKSPSTPSLPPPTPKKSPPPPPSHHS 165
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 49 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 225
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 49 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 225
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
S PP SP PC + P PPV + P T SP P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP 554
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPA--TVSPTPYPSTRDTHSXHA 394
S PP +S P R P PP S +P+ SP P P ++ + S A
Sbjct: 406 SPPPPPSSKMSPTVRAYSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRA 455
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
+T PP T +P+ P + T P+VPPV+ P T++P P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 222 EDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTP 386
ED +V + Q+ +RR SRA A V + + R+ + H HL +R P
Sbjct: 134 EDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRP 188
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 31.1 bits (67), Expect = 0.44
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 254 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSXHAILRLDLAG--RDL 427
TRP T+PS + T V PVS P +V+P+P + + + +L AG R+L
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSVH-PTSVAPSPVSACLTSEASKPVLANPAAGIRREL 215
Query: 428 TDYLMKILTERGYSFTTTAERE 493
+ + R S TTT R+
Sbjct: 216 ------VCSLRALSMTTTPVRQ 231
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
S PP +PS P T PV PP TP+ SPTP
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP 131
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
S PP +PS P T PV PP TP+ SPTP
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP 149
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
S PP +PS P T PV PP TP+ SPTP
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP 167
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
PP +PS P T PV PP TP+ SPTP
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP 113
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/75 (29%), Positives = 27/75 (36%)
Frame = +2
Query: 134 IPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 313
+PS VSPP P+ S S PP +PS P P
Sbjct: 144 VPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPP-PPVSPPPPTPTPSVPSPPDVTPTP 202
Query: 314 PPVSCWTPATVSPTP 358
P S +P V+PTP
Sbjct: 203 PTPSVPSPPDVTPTP 217
Score = 27.1 bits (57), Expect = 7.1
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Frame = +2
Query: 134 IPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 313
+PS VSPP P+ S S S PP P+ P PV
Sbjct: 126 VPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTP-SVPSPTPPV--PTDPMPSPPPPVS 182
Query: 314 PPVSCWTPATVSP---TPYPST 370
PP TP+ SP TP P T
Sbjct: 183 PPPPTPTPSVPSPPDVTPTPPT 204
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 239 CSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPYPS 367
C+ S+ PP S C R TR PVV P TP+ P PS
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPS 427
Score = 30.3 bits (65), Expect = 0.76
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDT 379
S PP T PS P S T P PP S +P SP P P T T
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST 566
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 248 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
+S+ PP SP+ CTRP PP P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP 554
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
S RPP +P P S + P P+ P SP P
Sbjct: 393 SPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPP 428
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 239 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYP 364
C +RPP S C R P PPV P P+P P
Sbjct: 372 CKAFLSRPPVNCGSFSCGRSVSP-RPPVVTPLPPPSLPSPPP 412
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.3 bits (65), Expect = 0.76
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 370
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 30.3 bits (65), Expect = 0.76
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 254 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTP 358
T PP +P+ P P PPVS P T SP P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 30.3 bits (65), Expect = 0.76
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 254 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTP 358
T PP +P+ P P PPVS P T SP P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 30.3 bits (65), Expect = 0.76
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = +2
Query: 131 IIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPV 310
+ P T + V PP P K PP +P KP ++ PV
Sbjct: 124 VYPPTKAPVKPPTK-PPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTK--PPV 180
Query: 311 VPPVSCWTPATVSPTPYPSTR 373
PPVS V P YP T+
Sbjct: 181 KPPVSPPAKPPVKPPVYPPTK 201
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTR 373
PP +P KP ++ PV PPVS V P YP T+
Sbjct: 94 PPTKAPVKPPTK--PPVKPPVSPPAKPPVKPPVYPPTK 129
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 242 SKHSTRPPCTSPSKPCSR------CTRPVVPPVSCWTPATVSPTPYP 364
+K +PP + P+KP + PV PPVS T V+P YP
Sbjct: 176 TKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYP 222
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 30.3 bits (65), Expect = 0.76
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 263 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHS 385
PC SP KP + +PV P PA +PTP PS + S
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPS 136
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 263 PCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPYPST 370
P +PS P P P S TP+T +P TP PST
Sbjct: 279 PTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPST 315
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 239 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCW 331
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 239 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWTPATVSPTPYPSTRDTHSXHAILR 403
C + PPC P P P +PP PA P P P T D ++L+
Sbjct: 70 CPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPDLPFASSLLK 125
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPYPS 367
+T+PP TSP P S T+ PP + P P TP P+
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPT 81
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 248 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 358
HS PP SP P P PPV P SP P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPP 577
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 239 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWT--PATVSPTPYPST 370
CS PP P + T+PV PPV S +T P+T TP P +
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPVFSAFTTEPSTAPFTPPPES 161
>At4g21350.1 68417.m03084 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582198; contains Pfam
profile PF04564: U-box domain
Length = 374
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = -2
Query: 335 ESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALGLRGASVRRTGCSSGAT 156
ESS + ++S+S A ++T ++ + ++ + + L+ L R +S+RR SGA
Sbjct: 79 ESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAV 138
Query: 155 RSSL 144
R++L
Sbjct: 139 RAAL 142
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 270 RRHPSRALAVRVRSYHRYRAGLRRR 344
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR 144
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 270 RRHPSRALAVRVRSYHRYRAGLRRR 344
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR 155
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 270 RRHPSRALAVRVRSYHRYRAGLRRR 344
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR 185
>At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family
protein identical to proline-rich protein 2 [Arabidopsis
thaliana] gi|7620011|gb|AAF64549
Length = 321
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 257 RPPCTSPSKPC-SRCTRPVV-PPVSCWTPATVSP 352
+PP P KPC + +P+ PPV + P V P
Sbjct: 224 KPPVVIPKKPCPPKIHKPIYKPPVPIYKPPVVIP 257
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 PPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPYPST 370
PP SPS P + T P PP + +P + +PT PST
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTD-PST 191
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 245 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 370
K S PP +PS P + P P + T SP P P+T
Sbjct: 136 KPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPAT 177
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 257 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYP 364
+PP T P T PVV P + P PTP P
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTP 192
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 370
PP +P P T PVV P + P PTP P T
Sbjct: 212 PPVITPPTP----TPPVVTPPTPTPPVVTPPTPTPPT 244
>At2g31510.1 68415.m03850 IBR domain-containing protein /
ARIADNE-like protein ARI7 (ARI7) identical to
ARIADNE-like protein ARI7 [Arabidopsis thaliana]
GI:29125028; contains similarity to Swiss-Prot:Q94981
ariadne-1 protein (Ari-1) [Drosophila melanogaster];
contains Pfam profile PF01485: IBR domain
Length = 562
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 278 SKPCSRCTRPVVPPVSCWTPATVSPTPY 361
SKPC RC RP+ C P Y
Sbjct: 292 SKPCPRCKRPIEKNQGCMHMTCTPPCKY 319
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYP 364
PP + P P + P+ PP S P +SP P P
Sbjct: 1087 PPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSP 1121
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 374 PS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATY-MAGVLNVSNMIWVIFSLLALGLR 198
PS + V ++PS S +PVV S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 197 G---ASVRRTGCSSGAT 156
G + VR G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 245 KHSTRPPCTSPS-KPCSRCTRPVVPPVSCWTPATVSPTPYPSTR 373
KH PP T P+ KP P PP T P P P R
Sbjct: 488 KHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPR 531
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +1
Query: 103 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 282
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 283 AVLSLYASGRTTGIVL 330
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
>At2g35700.1 68415.m04378 AP2 domain-containing transcription
factor, putative pFAM domain (PF00847)
Length = 194
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 341 TVSPTPYPSTRDTHSXHAILRLDLAGRDLTDYLMKI 448
T SP+P P+ +T S I D A DL D L+ +
Sbjct: 137 TSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNV 172
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 103 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 252
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 27.1 bits (57), Expect = 7.1
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Frame = +2
Query: 260 PPC-----TSPSKPCSRCTRPVVPPVSCWT--PATVSPTPYPST---RDTHSXH 391
PPC T + C R + P PP+SC T P+ P P P DTH H
Sbjct: 626 PPCLEMIFTDLTCACGRTSIP--PPLSCGTPVPSCQLPCPIPQPCGHSDTHGCH 677
>At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 513
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 344 PSPESSTIPVVRPDAYSESTAWMATYMAGVL 252
P P TIP P A +T W + GV+
Sbjct: 296 PPPPQQTIPQTNPQAPPMTTFWQGNHNPGVV 326
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 26.6 bits (56), Expect = 9.4
Identities = 18/80 (22%), Positives = 31/80 (38%)
Frame = +1
Query: 103 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 282
NW +E + + + P LL EA + PK+ E Q +++TF + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 283 AVLSLYASGRTTGIVLDSGD 342
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 251 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRD 376
+T PP +P P + PP + PAT P+ PS D
Sbjct: 41 ATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPAD 81
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTH 382
PP PS P + PV+PP+ + P+ + D H
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYH 58
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTH 382
PP PS P + PV+PP+ + P+ + D H
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYH 58
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 260 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTH 382
PP PS P + PV+PP+ + P+ + D H
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYH 58
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +2
Query: 263 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSXHAI 397
P P KP P P + PAT P P P+ +S HA+
Sbjct: 153 PQGGPKKPKKHHPGPATSPPAPSAPATSPPAP-PNAPPRNSSHAL 196
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 263 PCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPYPS 367
P + P P S PV PP V +P ++ P P P+
Sbjct: 136 PASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPA 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,522,259
Number of Sequences: 28952
Number of extensions: 252867
Number of successful extensions: 1163
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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