Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0143
(458 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 54 5e-08
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 52 2e-07
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 52 2e-07
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 51 3e-07
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 51 3e-07
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 51 3e-07
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 47 5e-06
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 46 2e-05
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 44 4e-05
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At4g34930.1 68417.m04952 1-phosphatidylinositol phosphodiesteras... 28 2.6
At4g04930.1 68417.m00717 fatty acid desaturase family protein si... 28 3.5
At4g16295.1 68417.m02472 self-incompatibility protein-related si... 27 4.6
At5g03460.1 68418.m00302 expressed protein 27 6.1
At3g21720.1 68416.m02740 isocitrate lyase, putative similar to i... 27 6.1
At5g52540.1 68418.m06519 expressed protein contains PF05684: Pro... 27 8.1
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g... 27 8.1
At3g23605.1 68416.m02969 UBX domain-containing protein contains ... 27 8.1
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 54.0 bits (124), Expect = 5e-08
Identities = 29/79 (36%), Positives = 41/79 (51%)
Frame = +1
Query: 37 GTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYIN 216
GT+L+NSA H+WG + ++ + FT GE +HN HH F R L ++
Sbjct: 208 GTWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNHHAFEASAR-HGLEWYQVD 266
Query: 217 LTTRFIDFFAWMGWAYDLK 273
LT I FF +G A D+K
Sbjct: 267 LTWYLICFFQALGLATDVK 285
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T+LVNSA H+WG + ++ + + A FGEG+HN HH F + R L +++
Sbjct: 280 TWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAFEFSAR-HGLEWWQLDM 338
Query: 220 TTRFIDFFAWMGWAYDLKTAS 282
T + F +G A D+K S
Sbjct: 339 TWYVVKFLQAIGLATDVKLPS 359
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 52.0 bits (119), Expect = 2e-07
Identities = 32/90 (35%), Positives = 45/90 (50%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T+LVNSA H+WG + ++ + + FT GE +HN HH F R L I++
Sbjct: 210 TWLVNSACHIWGSRSWNTKDTSRNVWWLSLFTMGESWHNNHHAFESSAR-QGLEWWQIDI 268
Query: 220 TTRFIDFFAWMGWAYDLKTASTNIIEKRAL 309
T I F +G A D+K S +K AL
Sbjct: 269 TWYLIRLFEVLGIATDVKLPSELQKQKMAL 298
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
TFLVNS H+WG + ++ S + + T GEG+HN HH F + R L +++
Sbjct: 203 TFLVNSVCHIWGTRAWNTSDFSKNNWWVAILTLGEGWHNNHHAFEFSAR-HGLEWWQLDI 261
Query: 220 TTRFIDFFAWMGWAYDLKTASTNIIEKRAL 309
T I F +G A ++K + ++ +AL
Sbjct: 262 TWCLIRFLEAIGLATNVKLPTETQMKGKAL 291
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T+LVNSA H+WG + + + + FT GE +HN HH F R L I++
Sbjct: 209 TWLVNSACHIWGSRSWKTKDTSRNVWWLSLFTMGESWHNNHHAFESSAR-QGLEWWQIDI 267
Query: 220 TTRFIDFFAWMGWAYDLKTASTNIIEKRAL 309
T I F +G A D+K S +K AL
Sbjct: 268 TWYLIRLFEVLGLATDVKLPSEIQKQKLAL 297
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 51.2 bits (117), Expect = 3e-07
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T+L+NSA H+WG + ++ + FT GE +HN HH F R L ++L
Sbjct: 209 TWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNHHAFEASAR-HGLEWYQVDL 267
Query: 220 TTRFIDFFAWMGWAYDLK 273
T I FF +G A D+K
Sbjct: 268 TWYLIWFFQVLGLATDVK 285
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 47.2 bits (107), Expect = 5e-06
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T L+NS H+WG + + + + + F+FGE +HN HH F R L I++
Sbjct: 217 TCLINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSAR-QGLEWWQIDI 275
Query: 220 TTRFIDFFAWMGWAYDLK 273
+ + FF +G A D+K
Sbjct: 276 SWYIVRFFEIIGLATDVK 293
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/90 (28%), Positives = 44/90 (48%)
Frame = +1
Query: 40 TFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINL 219
T L+NS H+WG + + + + + F+FGE +HN HH F R L I++
Sbjct: 215 TCLINSLCHVWGSRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSAR-QGLEWWQIDI 273
Query: 220 TTRFIDFFAWMGWAYDLKTASTNIIEKRAL 309
+ + F +G A D+K S + + A+
Sbjct: 274 SWYIVRFLEIIGLATDVKLPSESQRRRMAM 303
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 44.4 bits (100), Expect = 4e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Frame = +1
Query: 37 GTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYIN 216
GT+LVNSA H+ G + + + + T GE +HN HH F R L ++
Sbjct: 208 GTWLVNSACHICGSQAWQTNDTSRNVWWLALLTMGESWHNNHHAFETSAR-HGLEWYQLD 266
Query: 217 LTTRFIDFFAWMGWAYDLKTASTNIIEKRALR 312
+T I FF +G A ++K + K A+R
Sbjct: 267 ITWYLIWFFQALGLATNVKLPTDAQKRKMAIR 298
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 24 PPGCRHFSCK*RCS-FVGIQTVR*EPESYSKWHGKCIYFW*RI 149
PPG C S +V +TVR PE +H KCI W +I
Sbjct: 607 PPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKI 649
>At4g34930.1 68417.m04952 1-phosphatidylinositol
phosphodiesterase-related contains weak similarity to
1-phosphatidylinositol phosphodiesterase precursor (EC
4.6.1.13) (Phosphatidylinositol diacylglycerol-lyase)
(Phosphatidylinositol- specific phospholipase C)
(PI-PLC). (Swiss-Prot:P34024) [Listeria monocytogenes]
Length = 391
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -3
Query: 144 FTKSKCICHATLSSFQALIV-----RFVSPQMSSAI 52
F + +C+CH LSS+ +V RFVS S I
Sbjct: 172 FQEDRCVCHGALSSYNVDVVLNDVIRFVSETQSEII 207
>At4g04930.1 68417.m00717 fatty acid desaturase family protein
similar to D. melanogaster Des-1 protein, GenBank
accession number X94180; contains Pfam profile PF00487
Fatty acid desaturase domain
Length = 332
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 115 GMANAFTFGEGFHNYHHVFP 174
G N T+ G+HN HH FP
Sbjct: 259 GPLNLLTWSVGYHNEHHDFP 278
>At4g16295.1 68417.m02472 self-incompatibility protein-related
similar to self-incompatibility [Papaver nudicaule]
GI:3097262
Length = 151
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 124 NAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTN 288
N F++ G + H F W Y + G +N+ + F GW + TA T+
Sbjct: 75 NRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDVILFHRCGWKNCIWTAKTD 129
>At5g03460.1 68418.m00302 expressed protein
Length = 89
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = +1
Query: 211 INLTTRFIDFF-----AWMGWAY 264
INL R ID+F AW+GW Y
Sbjct: 16 INLMPRIIDYFMAKLYAWLGWEY 38
>At3g21720.1 68416.m02740 isocitrate lyase, putative similar to
isocitrate lyase GI:167144 from [Brassica napus]
Length = 576
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 22 IPRAAGTFLVNSAAHL-W-GYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFPWDY-RAD 192
I R T V++ AH W G YD+ LK Q G+++ G+G W AD
Sbjct: 502 IQREERTHGVDTLAHQKWSGANYYDRYLKTVQGGISSTAAMGKGVTEEQFKESWTRPGAD 561
Query: 193 ELGD 204
+G+
Sbjct: 562 GMGE 565
>At5g52540.1 68418.m06519 expressed protein contains PF05684:
Protein of unknown function (DUF819)
Length = 461
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 150 KSFTKSKCICHATLSSFQALIVRFVSPQMSSAIYKKSACSPGDPLV 13
KS + A+LS F+ RF+SP+ SS I + S PL+
Sbjct: 40 KSTSSRLSFSPASLSQFRNGTDRFLSPESSSPIRSVTVSSLSTPLI 85
>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1225
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 333 FVSPIPCS*CP-LLNNIGGSSF 271
F++PI C LLNN+GGSSF
Sbjct: 35 FITPIIFFICSKLLNNVGGSSF 56
>At3g23605.1 68416.m02969 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 152
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 378 QRSFLKTVSIHSIWSF 331
QRSFLK+ S+ +WSF
Sbjct: 85 QRSFLKSESVQLLWSF 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,915,205
Number of Sequences: 28952
Number of extensions: 209693
Number of successful extensions: 514
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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