Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0141
         (626 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169...    29   4.0  
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708...    27   9.2  

>09_06_0038 -
           20415363-20415883,20415917-20416596,20416858-20416911,
           20417440-20417489,20417665-20417800,20419030-20419128,
           20419411-20419676
          Length = 601

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 32  QPNNTYCKVTACHQSESNLILCSD 103
           QP+N+ C VT C + ++  ++C D
Sbjct: 272 QPDNSMCAVTECMEEDTGELICLD 295


>09_02_0302 -
           7086017-7086124,7086125-7086796,7087511-7088070,
           7088754-7089131,7089357-7089821,7090022-7090127,
           7090219-7090294,7090407-7090648,7090824-7090904,
           7091013-7091205,7091336-7091558,7091611-7091646,
           7091694-7091790
          Length = 1078

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 116 LFLLCPSKESSCFRSGDTLL 57
           L  LCP  ESSC  SG T+L
Sbjct: 712 LIKLCPGCESSCNASGQTIL 731


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,184,473
Number of Sequences: 37544
Number of extensions: 208977
Number of successful extensions: 388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)