Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0141
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.6  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   7.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   7.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   7.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   7.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   7.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   7.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.8  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 104 CPSKESSCFRSGDTLLPYS 48
           C SK   CF   D L PY+
Sbjct: 440 CNSKTKCCFAQDDGLCPYT 458


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 108 EK*SLCTIAIRLKNLQQSLALHLKLHSCS 194
           EK   CT+       ++++ LH+K HS S
Sbjct: 257 EKVYKCTLCHETFGSKKTMELHIKTHSDS 285


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 338 NRNLLLVCYILYYVGNVPV 282
           N N   +CY + Y+  +PV
Sbjct: 96  NNNYKQLCYNINYIEQIPV 114


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 338 NRNLLLVCYILYYVGNVPV 282
           N N   +CY + Y+  +PV
Sbjct: 96  NNNYKQLCYNINYIEQIPV 114


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 338 NRNLLLVCYILYYVGNVPV 282
           N N   +CY + Y+  +PV
Sbjct: 96  NNNYKQLCYNINYIEQIPV 114


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 338 NRNLLLVCYILYYVGNVPV 282
           N N   +CY + Y+  +PV
Sbjct: 96  NNNYKQLCYNINYIEQIPV 114


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 338 NRNLLLVCYILYYVGNVPV 282
           N N   +CY + Y+  +PV
Sbjct: 96  NNNYKQLCYNINYIEQIPV 114


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 329 LLLVCYILYYVGNVPV 282
           LL   Y+L ++G+VPV
Sbjct: 62  LLRAGYVLIHIGSVPV 77


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 68   DTLLPYSKYYLVGF 27
            D + PY+ ++L+GF
Sbjct: 1720 DEICPYATFHLLGF 1733


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 192 SISMEF*SSEPATPR*NF 245
           S+S+     EP TPR NF
Sbjct: 132 SVSLSSPPREPGTPRINF 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,487
Number of Sequences: 438
Number of extensions: 3001
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)