Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0140
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 226 3e-60
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 130 2e-31
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 130 2e-31
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 127 2e-30
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 111 9e-26
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 97 3e-21
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 89 4e-19
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 32 0.086
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 31 0.20
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 27 2.5
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 5.7
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 25 9.9
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 9.9
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 9.9
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 226 bits (552), Expect = 3e-60
Identities = 108/197 (54%), Positives = 146/197 (74%), Gaps = 1/197 (0%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
A++VFSPDG LLQVEY QEAVR+G+TA E+K+V KLQ +KI ++
Sbjct: 7 ALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMV 66
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
D+HV +AFAGL ADARILI++A++E Q+HKL + DPV++EY+TRY+AG++QKYTQS G R
Sbjct: 67 DNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVR 126
Query: 441 PFGISCLIGGFDY-DGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATE 617
PFG+S LI GFD D +P ++QTEP+GIY WKA A GR++K RE+LEKN+ E +
Sbjct: 127 PFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNW--KEGLSR 184
Query: 618 NGAVKLAIRALLEVVQS 668
+ + LA+ +LLEVVQ+
Sbjct: 185 DETIHLAVSSLLEVVQT 201
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 130 bits (314), Expect = 2e-31
Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 2/197 (1%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
++T FSP+G L+Q+EYA AV G T+ EKK ++L ++ K+C +
Sbjct: 8 SLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAI 67
Query: 261 DDHVVMAFAGLTADARILINRAQIECQS--HKLTVEDPVTLEYITRYIAGLKQKYTQSNG 434
+ M ++G+ D R+L+++++ Q+ K+ E P T + + + IA + Q+ TQS G
Sbjct: 68 TPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQSGG 126
Query: 435 RRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVAT 614
RPFG+S L+ G D G P L+Q +PSG Y+ WKA A G+S+ + FLEK Y DE+
Sbjct: 127 VRPFGVSLLVAGMDEKG-PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYN-DELEL 184
Query: 615 ENGAVKLAIRALLEVVQ 665
++ AV AI AL E +
Sbjct: 185 DD-AVHTAILALKETFE 200
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 130 bits (314), Expect = 2e-31
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Frame = +3
Query: 87 TVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKL-QEERTVRKICLLD 263
T+FSP+G L QVEYA EA+ A EKK +KL ++E + K+ +
Sbjct: 10 TIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIG 69
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP 443
D+++ A AGLTADA ILIN A+ Q + T + + E + R + LKQ YTQ G RP
Sbjct: 70 DNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRP 129
Query: 444 FGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENG 623
FG+S L G+D+ LFQ+ PSG Y W+AN+ G ++ +V+ + + Y D E
Sbjct: 130 FGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEAS 189
Query: 624 AVKLAIRALLEVVQS 668
A +A++ L + + S
Sbjct: 190 A--MAVKFLSKTLDS 202
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 127 bits (306), Expect = 2e-30
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLD 263
+ FSP+G L QVEYA EA++ GSTA EK+ + L E +V K+ +D
Sbjct: 12 VNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEID 71
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNG--- 434
H+ A +GLTADAR +I A+++ Q+H+ T ++P +E T+ I L ++ +
Sbjct: 72 SHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEE 131
Query: 435 ---RRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADE 605
RPFG++ LI G D G P L+ +EPSG Y+ ++A A G ++ + L K + D
Sbjct: 132 RIMSRPFGVALLIAGIDEHG-PQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDM 190
Query: 606 VATENGAVKLAIRALLEVVQ 665
E A L ++ L +V++
Sbjct: 191 TLEE--AEVLILKVLRQVME 208
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 111 bits (267), Expect = 9e-26
Identities = 61/192 (31%), Positives = 101/192 (52%)
Frame = +3
Query: 87 TVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDD 266
T +SP G L QVEYA EA+++GS K++ +L + +K+ +DD
Sbjct: 11 TTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ--KKLIRIDD 68
Query: 267 HVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPF 446
H+ +A AGL DAR+L N + E S K P+ + + +A Q TQ GRRP+
Sbjct: 69 HIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPY 128
Query: 447 GISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGA 626
G+ L+ G+D G PHL + +PSG+ E+ + G +++ R ++E+N ++
Sbjct: 129 GVGFLVIGYDESG-PHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREEL 187
Query: 627 VKLAIRALLEVV 662
+ A+RAL + +
Sbjct: 188 ILSALRALRDTL 199
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 96.7 bits (230), Expect = 3e-21
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Frame = +3
Query: 93 FSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHV 272
FSPDG L Q EYA +AV ST EK +KL + R +I +D H+
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 273 VMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGI 452
+A G D + ++ RA+ E S + P+ I + Q +T + RPFG+
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 453 SCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK-NYTADEVATENGAV 629
+ +D +G PHL+ EP+G+Y+ + A G+ + R LEK N+++ ++ AV
Sbjct: 134 MSFVATYDSEG-PHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKM---KDAV 189
Query: 630 KLAIRAL 650
K A R L
Sbjct: 190 KEAARIL 196
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 89.4 bits (212), Expect = 4e-19
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
ITVFSP+G L QVEYA +A G T+ +KK KL + TV+ + +
Sbjct: 11 ITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPI 70
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
+ G ADAR ++RA+ E + P+ + + + +A + Q TQ R
Sbjct: 71 TKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMR 130
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATE- 617
P G++ + D + P LF+ +P+G Y +KA + G +LEK + D + +
Sbjct: 131 PLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNL 190
Query: 618 NGAVKLAIRALL 653
V+ I+AL+
Sbjct: 191 TDTVETGIQALM 202
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 31.9 bits (69), Expect = 0.086
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +3
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR- 440
D +V+ +G ADA L+ R Q + E ++ + + L G+R
Sbjct: 52 DDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLY------GKRF 105
Query: 441 -PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 584
P+ + + G D +G ++ +P G Y A G +A + FL+
Sbjct: 106 FPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLD 154
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/72 (19%), Positives = 37/72 (51%)
Frame = +3
Query: 204 KKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEY 383
+ S L +TV+K+ ++ +++ AG AD + +EC+ H+L ++ +++
Sbjct: 80 RASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSA 139
Query: 384 ITRYIAGLKQKY 419
++ ++ + Y
Sbjct: 140 ASKILSNITYSY 151
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 319 FINIRASA-VNPANAITT*S--SKRHIFLTVRSSCNLATDF 206
F+N SA +NP N + T SK+ +FLT SS ++ DF
Sbjct: 261 FMNTDISADINPINVLITALLISKKVLFLTKTSSASVLADF 301
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.7
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Frame = -1
Query: 484 PS*SNPPIKHEIPNGRRPLL*VYFCLRP--------AMYLVIYS-NVTGSSTVNLCD*HS 332
P+ P +IPN R +L + C P MYL S N T S + L HS
Sbjct: 375 PNFPEPKFFEDIPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLNSTEVSVITLAPQHS 434
Query: 331 ICARFINIR-ASAVNPANAITT*SSKR 254
IN+ A A+ IT + KR
Sbjct: 435 FLNIVINLNPALALKSYTIITLLNGKR 461
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 482 IIVESSYQTRNTKWSTTIALSIFLFETCYVSCNILQCYWILD 357
II S Y+T N W++TI ++CN+LQ + +D
Sbjct: 549 IIYPSLYKTANEHWNSTIQA---------IACNVLQIFVDMD 581
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 419 IFLFETCYVSCNILQC 372
I LF+TCY+ C + C
Sbjct: 567 IVLFDTCYMVCTYIVC 582
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 486 SPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 599
SP LF I + NAT S +V FL+K T+
Sbjct: 247 SPKLFSPSKQAIMGTRQPNATSGSPLSVTPFLQKTSTS 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,923
Number of Sequences: 5004
Number of extensions: 55457
Number of successful extensions: 157
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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