Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0140
(673 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 253 7e-68
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 253 9e-68
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 139 1e-33
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 133 1e-31
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 132 2e-31
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 129 2e-30
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 127 6e-30
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 126 1e-29
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 126 2e-29
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 107 7e-24
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 103 1e-22
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 103 1e-22
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 46 2e-05
At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative... 34 0.099
At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1) (... 34 0.099
At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related... 30 1.6
At2g30500.1 68415.m03715 kinase interacting family protein simil... 29 2.1
At4g12020.1 68417.m01912 protein kinase family protein similar t... 29 3.7
At3g52080.1 68416.m05715 cation/hydrogen exchanger, putative (CH... 28 4.9
At5g15280.1 68418.m01790 pentatricopeptide (PPR) repeat-containi... 28 6.5
At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel... 27 8.6
At1g22040.1 68414.m02757 kelch repeat-containing F-box family pr... 27 8.6
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 253 bits (620), Expect = 7e-68
Identities = 126/198 (63%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
AITVFSPDGHL QVEYA EAVRKG+ A EKKS KLQ+ R+ RKI L
Sbjct: 7 AITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSL 66
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
D+H+ +A AGL ADAR+LIN+A+IECQSH+LT+EDPVT+EYITRYIAGL+QKYTQS G R
Sbjct: 67 DNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVR 126
Query: 441 PFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATE 617
PFG+S LI GFD Y P L+QT+PSG + WKANATGR++ ++REFLEKNY + ++
Sbjct: 127 PFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNY---KESSG 183
Query: 618 NGAVKLAIRALLEVVQSG 671
+KLAIRALLEVV+SG
Sbjct: 184 QETIKLAIRALLEVVESG 201
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 253 bits (619), Expect = 9e-68
Identities = 129/198 (65%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
AITVFSPDGHL QVEYA EAVRKG+ A EKKS KLQ+ R+ RKI L
Sbjct: 7 AITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSL 66
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
D+H+ +A AGL ADAR+LIN+A+IECQSH+LT+EDPVT+EYITRYIAGL+QKYTQS G R
Sbjct: 67 DNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVR 126
Query: 441 PFGISCLIGGFD-YDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATE 617
PFG+S LI GFD Y P L+QT+PSG + WKANATGR++ ++REFLEKNY E A +
Sbjct: 127 PFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNY--KESAGQ 184
Query: 618 NGAVKLAIRALLEVVQSG 671
VKLAIRALLEVV+SG
Sbjct: 185 E-TVKLAIRALLEVVESG 201
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 139 bits (337), Expect = 1e-33
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 1/195 (0%)
Frame = +3
Query: 87 TVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKL-QEERTVRKICLLD 263
T+FSP+G L QVEYA EA+ +A EKK +KL Q + K+ +D
Sbjct: 10 TIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKID 69
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP 443
DHV A AG+ +DA ILIN A+++ Q + ++P+ +E + + + KQ YTQ G RP
Sbjct: 70 DHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRP 129
Query: 444 FGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENG 623
FG+S L G+D L+ ++PSG Y WKA A G + + + L+++Y D AT
Sbjct: 130 FGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDD--ATREE 187
Query: 624 AVKLAIRALLEVVQS 668
AV+LA++ L + + S
Sbjct: 188 AVELALKVLTKTMDS 202
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 133 bits (321), Expect = 1e-31
Identities = 67/192 (34%), Positives = 111/192 (57%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
++T FSP G L+Q+E+A AV G T+ EKK + L +E +V+KI L
Sbjct: 9 SLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
++ + ++G+ D R+L+ +++ + + + ++P+ + + R A + Q++TQS G R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVR 128
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATEN 620
PFG+S L+ G+D D P L+Q +PSG Y+ WKA+A G++ + FLEK YT D +
Sbjct: 129 PFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDD- 186
Query: 621 GAVKLAIRALLE 656
A+ AI L E
Sbjct: 187 -AIHTAILTLKE 197
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 132 bits (319), Expect = 2e-31
Identities = 67/192 (34%), Positives = 110/192 (57%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
++T FSP G L+Q+E+A AV G T+ EKK + L +E +V+KI L
Sbjct: 9 SLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
++ ++G+ D R+L+ +++ + + + ++P+ + + R A + Q++TQS G R
Sbjct: 69 TPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVR 128
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATEN 620
PFG+S L+ G+D D P L+Q +PSG Y+ WKA+A G++ + FLEK YT D +
Sbjct: 129 PFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDD- 186
Query: 621 GAVKLAIRALLE 656
A+ AI L E
Sbjct: 187 -AIHTAILTLKE 197
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 129 bits (311), Expect = 2e-30
Identities = 68/194 (35%), Positives = 111/194 (57%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLD 263
+T +SP G L QVEYA EAV++GS A K+ ++L + RKI +D
Sbjct: 10 VTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ--RKIFKVD 67
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP 443
DH+ +A AGLTAD R+L + E +H T E P+ + + ++A Q TQ + +RP
Sbjct: 68 DHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRP 127
Query: 444 FGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENG 623
+G+ L+GG D G+ HL+ PSG Y+E++A A G ++ + +LE+ + + + +++
Sbjct: 128 YGVGLLVGGLDESGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKED 186
Query: 624 AVKLAIRALLEVVQ 665
+K AI A+ E +Q
Sbjct: 187 LIKDAIMAIRETLQ 200
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 127 bits (307), Expect = 6e-30
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLD 263
+ FSP+G L QVEYA EA++ GSTA EK+ + L E +V KI +D
Sbjct: 12 VNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEID 71
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY---TQSNG 434
DH+ A +GL ADAR L+ A++E Q+H+ + +P+T+E T+ + L ++ + +
Sbjct: 72 DHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESM 131
Query: 435 RRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVAT 614
RPFG+S LI G D +G P L+ T+PSG +++ A A G ++ L++ + D
Sbjct: 132 SRPFGVSLLIAGHDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQ 190
Query: 615 ENGAVKLAIRALLEVVQ 665
E A +A+ L +V++
Sbjct: 191 E--AETIAVSILKQVME 205
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 126 bits (305), Expect = 1e-29
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLD 263
+ FSP+G L QVEYA EA++ GSTA EK+ + L E +V KI +D
Sbjct: 12 VNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEID 71
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY---TQSNG 434
DH+ A +GL ADAR L+ A++E Q+H+ + +P+T+E T+ + L ++ + +
Sbjct: 72 DHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESM 131
Query: 435 RRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVAT 614
RPFG+S LI G D +G P L+ T+PSG +++ A A G ++ L++ + D
Sbjct: 132 SRPFGVSLLIAGHDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQ 190
Query: 615 ENGAVKLAIRALLEVVQ 665
E A +A+ L +V++
Sbjct: 191 E--AETIAVSILKQVME 205
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 126 bits (303), Expect = 2e-29
Identities = 68/194 (35%), Positives = 109/194 (56%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLD 263
+T +SP G L QVEYA EAV++GS A K+ ++L + RKI +D
Sbjct: 10 VTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ--RKIFKVD 67
Query: 264 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP 443
DH+ +A AGLTAD R+L + E +H T E P+ + + ++A Q TQ + +RP
Sbjct: 68 DHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRP 127
Query: 444 FGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENG 623
+G+ L+GG D G+ HL+ PSG Y+E++A A G ++ + +LE+ + + ++
Sbjct: 128 YGVGLLVGGLDESGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSRED 186
Query: 624 AVKLAIRALLEVVQ 665
+K AI A+ E +Q
Sbjct: 187 LIKDAILAVRETLQ 200
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 107 bits (257), Expect = 7e-24
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
IT+FSP+G L QVEYA +AV+ G T+ +KK KL ++ +V + +
Sbjct: 13 ITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPI 72
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
++ + G+TADAR L+ +A+ + + T + ++ + ++IA Q YTQ R
Sbjct: 73 TKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMR 132
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATEN 620
P G+ ++ G D + P L++ +P+G +Y KA + G + FLEK + T +
Sbjct: 133 PLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFD 192
Query: 621 GAVKLAIRALLEVVQ 665
V+ AI AL V+Q
Sbjct: 193 ETVQTAISALQSVLQ 207
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 103 bits (247), Expect = 1e-22
Identities = 59/186 (31%), Positives = 94/186 (50%)
Frame = +3
Query: 81 AITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
++T FSPDG + Q+EYA +AV T EK +K+ + R+I +
Sbjct: 11 SVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSV 70
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
H MA AGL AD R ++ RA+ E +S++ D V ++ ++ +A T R
Sbjct: 71 HRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLR 130
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATEN 620
PFG ++GG+D DG P L+ EPSGI Y + A G+ + + +EK E+ +
Sbjct: 131 PFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEK-LNLSEMTCKE 188
Query: 621 GAVKLA 638
G +++A
Sbjct: 189 GVIEVA 194
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 103 bits (246), Expect = 1e-22
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +3
Query: 84 ITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLL 260
IT+FSP+G L QVEYA +AV+ G T+ +KK KL ++ +V + +
Sbjct: 13 ITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPV 72
Query: 261 DDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR 440
++ + G+TAD+R L+ +A+ E + + + + ++IA Q YTQ R
Sbjct: 73 TKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMR 132
Query: 441 PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATEN 620
P G+ ++ G D + P L++ +P+G +Y KA + G + FLEK + T +
Sbjct: 133 PLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYD 192
Query: 621 GAVKLAIRALLEVVQ 665
V+ AI AL V+Q
Sbjct: 193 ETVQTAISALQSVLQ 207
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +3
Query: 450 ISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAV 629
++C + G+D + L+ ++PSG Y W+A A G + + + L+++Y D AT V
Sbjct: 354 VACAVAGWDRNHGFQLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKDD--ATREEVV 411
Query: 630 KLAIRAL 650
+LAI+ L
Sbjct: 412 QLAIKVL 418
>At3g26340.1 68416.m03286 20S proteasome beta subunit E, putative
very strong similarity to SP|O23717 Proteasome subunit
beta type 5 precursor (EC 3.4.25.1) (20S proteasome
subunit E) (Proteasome epsilon chain) {Arabidopsis
thaliana}
Length = 273
Score = 33.9 bits (74), Expect = 0.099
Identities = 29/139 (20%), Positives = 61/139 (43%)
Frame = +3
Query: 234 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 413
++V+KI ++ +++ AG AD + I+C+ H+L + +++ ++ +A +
Sbjct: 86 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLY 145
Query: 414 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 593
Y + +I G+D G P L+ + G + + G + L+ Y
Sbjct: 146 SYRGMG----LSVGTMIAGWDETG-PGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 200
Query: 594 TADEVATENGAVKLAIRAL 650
D E A +LA R++
Sbjct: 201 KFDMSVEE--ASELARRSI 217
>At1g13060.1 68414.m01514 20S proteasome beta subunit E1 (PBE1)
(PRCE) identical to GB:O23717; identical to cDNA
proteasome subunit prce GI:2511595
Length = 274
Score = 33.9 bits (74), Expect = 0.099
Identities = 29/139 (20%), Positives = 61/139 (43%)
Frame = +3
Query: 234 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 413
++V+KI ++ +++ AG AD + I+C+ H+L + +++ ++ +A +
Sbjct: 86 QSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLY 145
Query: 414 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 593
Y + +I G+D G P L+ + G + + G + L+ Y
Sbjct: 146 SYRGMG----LSVGTMIAGWDETG-PGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 200
Query: 594 TADEVATENGAVKLAIRAL 650
D E A +LA R++
Sbjct: 201 KYDMSVEE--ASELARRSI 217
>At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 302
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 402 GLKQKYTQSNGRRPFGISCLI-GGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREF 578
G K+T+S+ FG S +I G D DG + +G N T S + + +
Sbjct: 136 GNDPKFTRSSDSEAFGFSSMIWGQGDDDGMDKEHEVNGNGA----AENRTNESGEEMLKE 191
Query: 579 LEKNYTADEVATENGAVK 632
E+ E+ ENGA K
Sbjct: 192 HEEEVANTELLNENGAAK 209
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 201 EKKSVAKLQEERTVRKICLLD-DHVVMAFAGLTADA--RILINRAQIECQSHKLTVE 362
EKK V KLQE + K L D D+ + A +DA +I +AQI+ + K+ E
Sbjct: 324 EKKEVLKLQERLAMVKTSLQDRDNEIRALKTAVSDAEQKIFPEKAQIKGEMSKMLEE 380
>At4g12020.1 68417.m01912 protein kinase family protein similar to
mitogen-activated protein kinase [Arabidopsis thaliana]
GI:1255448; contains Pfam profiles PF02671: Paired
amphipathic helix repeat, PF03106: WRKY DNA-binding
domain, PF00560: Leucine Rich Repeat, PF00069: Protein
kinase domain, PF00931: NB-ARC domain
Length = 1798
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 534 SIHNIYQKVQFGTSVVNHHSRILLSNTKY 448
S+ +YQ+ Q G SVV+ ++R +L KY
Sbjct: 1711 SLRKLYQRNQLGDSVVSLYTRQILDGLKY 1739
>At3g52080.1 68416.m05715 cation/hydrogen exchanger, putative
(CHX28) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 732
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 312 LINRAQIECQSHKLTVEDPVTLEYITRYIAG 404
++NRA + Q ++ ++D E+ RYIAG
Sbjct: 605 ILNRASVVDQEEEMKLDDECFAEFYERYIAG 635
>At5g15280.1 68418.m01790 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1227
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 269 RRNGICRIDSRRSYINKPCTNRMSITQVN 355
R+N IC + S R Y+ K C S++ ++
Sbjct: 866 RKNIICSVKSYREYVRKMCLEPQSLSAIS 894
>At2g28260.1 68415.m03430 cyclic nucleotide-regulated ion channel,
putative (CNGC15) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 678
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 396 IAGLKQKYTQSNGRRPFGISCLIGGFDYDG 485
I G YT + GR F SCLIG D+ G
Sbjct: 512 IRGHLDSYTTNGGRTGFFNSCLIGPGDFCG 541
>At1g22040.1 68414.m02757 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 475
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 462 IGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVAT-ENGAVKL 635
+GG YD +L+ PSG+ W A G V + + Y D ++ ENG +K+
Sbjct: 311 VGGEVYDPETNLWVEMPSGMGEGWPARQAGTKLSVVVD--GELYAFDPSSSMENGKIKV 367
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,735,378
Number of Sequences: 28952
Number of extensions: 277394
Number of successful extensions: 710
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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