Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0138
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LGU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=...    34   3.2  
UniRef50_Q22L40 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_UPI0000F20EBE Cluster: PREDICTED: hypothetical protein;...    32   9.7  

>UniRef50_A6LGU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
           Parabacteroides distasonis ATCC 8503|Rep:
           Peptidyl-prolyl cis-trans isomerase - Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 172

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 389 SSLNCLTIIYNIFRTAKMREYLYYNALLSCLYKAKFI 279
           S  N   I+Y + +T + +E +YY + + C YK  FI
Sbjct: 55  SQSNAGFILYKVLKTGESKEPIYYTSKVECYYKGTFI 91


>UniRef50_Q22L40 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 347

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +2

Query: 458 RNIRVDSVK*TTCSIIEIINK*IKLPSYLNDTLSNTGK*NSTKV 589
           +N     V     S++ + NK + LPS+LN T++NT K +S ++
Sbjct: 12  KNTSTGDVNPMNTSLVSLKNKFMVLPSFLNGTINNTNKSSSKQI 55


>UniRef50_UPI0000F20EBE Cluster: PREDICTED: hypothetical protein;
           n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 291

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
 Frame = -3

Query: 322 TIMHC*VVCIRLNLF-ISVTYYK*SNFNRSMVALRDLQSESKNEIEIXXRIPNDIHIVF- 149
           ++ +C VVC  +N+  +S+++YK  N   S +++ DL       +E+  +  N    V  
Sbjct: 134 SVQYCSVVCSVVNVSAVSLSWYK-GNSVLSSISVSDLSISLSLPLEVEYQDKNTYSCVVN 192

Query: 148 -----LTFTLNIYKYILYLTDLNVTL 86
                LT  LNI ++ L  +DL +TL
Sbjct: 193 NTISNLTTHLNITEHCLTCSDLGITL 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,980,825
Number of Sequences: 1657284
Number of extensions: 8637658
Number of successful extensions: 15449
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15447
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)