Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0138
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.39 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 389 SSLNCLTIIYNIFRTAKMREYLYYNALLSCLYKAKF 282
           SS+N L +I  IF    ++++     L+ C+Y   F
Sbjct: 5   SSINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSF 40


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -3

Query: 178 RIPNDIHIVFLTFTLNIYKYILYLTDLNVTL 86
           +IP+++   + T+ LN Y ++    + +V L
Sbjct: 337 QIPSEVEDKYTTYFLNTYPHLFNFFEFSVPL 367


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 414 LSSIETNEYYIFFNNVIFVSIPSSKQHAVLLR 509
           LSS     Y+IF    IFV++   ++  ++LR
Sbjct: 81  LSSTSIYAYFIFGAETIFVTMVFKERLYLILR 112


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 414 LSSIETNEYYIFFNNVIFVSIPSSKQHAVLLR 509
           LSS     Y+IF    IFV++   ++  ++LR
Sbjct: 81  LSSTSIYAYFIFGAETIFVTMVFKERLYLILR 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,726
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)