Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0138
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.45 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.45 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 60  TSVKPQPAYNVTFKSVKYNIYLYMFNVNVRK 152
           T V P P    T K VKY+++L    + +R+
Sbjct: 900 TVVSPPPTKRRTMKVVKYHLFLTNLYIQMRE 930


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 60   TSVKPQPAYNVTFKSVKYNIYLYMFNVNVRK 152
            T V P P    T K VKY+++L    + +R+
Sbjct: 938  TVVSPPPTKRRTMKVVKYHLFLTNLYIQMRE 968


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 377 CLTIIYNIFRTAKMRE--YLYYNALLSCLYKAKFIYKCNI 264
           C T+I N       +   YL   A  +C+   +F YK NI
Sbjct: 468 CDTLINNAVAVENFKGGMYLRLKARRACMNYERFTYKINI 507


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 377 CLTIIYNIFRTAKMRE--YLYYNALLSCLYKAKFIYKCNI 264
           C T+I N       +   YL   A  +C+   +F YK NI
Sbjct: 468 CDTLINNAVAVENFKGGMYLRLKARRACMNYERFTYKINI 507


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,343
Number of Sequences: 438
Number of extensions: 3078
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)