Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0134
         (674 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9AHX3 Cluster: Putative uncharacterized protein; n=2; ...    36   1.2  
UniRef50_A2Y237 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q8RBS3 Cluster: Transcriptional regulator; n=3; Thermoa...    33   6.3  
UniRef50_Q8I3Q3 Cluster: Putative uncharacterized protein PFE104...    33   8.4  

>UniRef50_Q9AHX3 Cluster: Putative uncharacterized protein; n=2;
           Candidatus Carsonella ruddii|Rep: Putative
           uncharacterized protein - Carsonella ruddii
          Length = 61

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -2

Query: 601 FLLLSHKSGHVFLLNFFIYYLKTCNFLKKSK 509
           FL L  +  ++FL+NFF Y+   CNF+KK K
Sbjct: 8   FLNLKKRYFYIFLINFF-YFFNKCNFIKKKK 37


>UniRef50_A2Y237 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 805

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -2

Query: 565 LLNFFIYYLKTCNFLKKSKRSVLLFHL*TYLKIKQHQNFFTVILKQSCGQMV 410
           L  F I  +  C+F KK KRS+L   + TY ++ +  N FT +L Q    MV
Sbjct: 474 LATFSICIMLCCHFCKKPKRSLLGVRVFTYKELSKATNGFTELLGQGGFGMV 525


>UniRef50_Q8RBS3 Cluster: Transcriptional regulator; n=3;
           Thermoanaerobacter|Rep: Transcriptional regulator -
           Thermoanaerobacter tengcongensis
          Length = 220

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -1

Query: 497 VISFVNVFKNKTTSKLLYCD----FKTKLWANGNVKDILLLI 384
           +I+F N  KNKT S   Y D    FK KL+ N N + IL LI
Sbjct: 134 IIAFANQLKNKTRSLSDYLDLYNAFKGKLYTNLNYEQILALI 175


>UniRef50_Q8I3Q3 Cluster: Putative uncharacterized protein PFE1045c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFE1045c - Plasmodium falciparum
            (isolate 3D7)
          Length = 2054

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 370  QNVTYISNNISFTLPFAHNFVLKSQ*RSFDVVLFLNTFTNEITIHFFCFFLKN 528
            +N+ Y+ NN+    P  +N  L  Q R      FLN +T     H F F L N
Sbjct: 985  ENMKYVINNLKIKYPLQNNITLNDQNREEIAYYFLNYYTK----HIFRFDLPN 1033


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,894,605
Number of Sequences: 1657284
Number of extensions: 10540098
Number of successful extensions: 19950
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19948
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)