Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0134
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0654 - 16646717-16647230,16647472-16647633,16648004-166482...    29   4.5  
06_01_0934 - 7212408-7212794,7212887-7213416,7214192-7214302,721...    28   5.9  
10_01_0332 - 3635909-3635912,3635947-3636003,3636004-3636053,363...    28   7.8  

>05_03_0654 -
           16646717-16647230,16647472-16647633,16648004-16648203,
           16648453-16648624,16650226-16650647,16650742-16650987
          Length = 571

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 86  GCKGHGTKIFTISSCRFLQPG 24
           GC+ HGT  FT++S R L+ G
Sbjct: 500 GCQTHGTSSFTVTSSRALKGG 520


>06_01_0934 -
           7212408-7212794,7212887-7213416,7214192-7214302,
           7214322-7214811
          Length = 505

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 149 KQKKYFSLTFLF*YSILLVVQGCKGHGTKIFTISSCRFLQ 30
           K  +Y+SL++L   SI + +Q C  + ++    +  RFL+
Sbjct: 368 KSTRYYSLSWLSSTSITMCLQACNAYTSRFLNRADKRFLE 407


>10_01_0332 -
           3635909-3635912,3635947-3636003,3636004-3636053,
           3637887-3637945,3638054-3638114,3638938-3640479
          Length = 590

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 583 KSGHVFLLNFFIYYLKTCN 527
           ++G V+L   F+Y+LK+CN
Sbjct: 551 QTGEVYLKECFVYFLKSCN 569


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,919,368
Number of Sequences: 37544
Number of extensions: 254725
Number of successful extensions: 376
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)