Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0132
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    28   0.055
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 0.055
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 157 VHSTYLMFRYLGTYFSVISSVIRRWRLCRRYSYSL 53
           + +T  + R L  YFSVI S++R  R+ R + Y L
Sbjct: 9   MQTTLRLIRDLSLYFSVIYSLLRVKRMMRSWYYLL 43


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 68  PPTQPPPSDNTANNRKICSKIP 133
           PP  PP  ++ A   +  SKIP
Sbjct: 732 PPPPPPRVESFAETVRTVSKIP 753


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/50 (22%), Positives = 20/50 (40%)
 Frame = +2

Query: 95  NTANNRKICSKIPKHQVCTMDRAQIINGALESKELRSDTYELVRLRRCLR 244
           N     K  SK+PK  +   D   I++         +DT  ++    C++
Sbjct: 236 NVKRKSKEISKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYAFCVQ 285


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/50 (22%), Positives = 20/50 (40%)
 Frame = +2

Query: 95  NTANNRKICSKIPKHQVCTMDRAQIINGALESKELRSDTYELVRLRRCLR 244
           N     K  SK+PK  +   D   I++         +DT  ++    C++
Sbjct: 236 NVKRKSKEISKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYAFCVQ 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,833
Number of Sequences: 336
Number of extensions: 2605
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)