Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0131
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40797-9|AAK95870.1|  349|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical p...    27   7.9  
AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm rec...    27   7.9  

>U40797-9|AAK95870.1|  349|Caenorhabditis elegans Hypothetical
           protein C28C12.12 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 162 NIDGVIYTSDSDFEHKRGSFTFKDELLEDHEKILIRKNLVPNHINYLFR 308
           NID   +     F   RG+F  +D+ + D+ K  +RK  + N +  +FR
Sbjct: 230 NIDSEEFEKKIKFMGIRGNFFKEDKSIADYTKKKVRKIFLDNAVKKVFR 278


>Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 111 CVRNKYKRSRQWKLFGYNIDGVI-YTSDSDFEHKRGSFTFKDELLEDHEK 257
           C+ N  + S         + G++  TS SD  HK      KDEL+++ EK
Sbjct: 202 CIENADEVSTNRTTIETQMGGILGVTSKSDKRHKMMFSVLKDELMQNIEK 251


>Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 111 CVRNKYKRSRQWKLFGYNIDGVI-YTSDSDFEHKRGSFTFKDELLEDHEK 257
           C+ N  + S         + G++  TS SD  HK      KDEL+++ EK
Sbjct: 202 CIENADEVSTNRTTIETQMGGILGVTSKSDKRHKMMFSVLKDELMQNIEK 251


>AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm
           receptor protein 206 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 99  CGTNCVRNKYKRSRQWKLFGYNIDGVIYTSDSDFEHKRGSFTFKDELL 242
           CG   V   Y R+   + FG ++D V+Y     F+ + G F    ++L
Sbjct: 156 CGPKDVLTNYIRNNLMETFGLSVDEVVYIGPYFFD-ENGKFLLDWDVL 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,438,980
Number of Sequences: 27780
Number of extensions: 198760
Number of successful extensions: 450
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)