Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0129
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   3.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 520 FHTQCPITCLNTFR 561
           F TQCPI   NTFR
Sbjct: 217 FVTQCPIQQGNTFR 230


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 520 FHTQCPITCLNTFR 561
           F TQCPI   NTFR
Sbjct: 217 FVTQCPIQQGNTFR 230


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 375 QPPRHYTERRDYYQNQQDLIP 437
           Q  R+Y    D YQ+ Q L+P
Sbjct: 172 QENRYYNNSPDQYQSYQILLP 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,582
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)