Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0128
         (364 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.55 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   6.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.55
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 48   LVPNSCSPGIH 16
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 24/76 (31%), Positives = 32/76 (42%)
 Frame = -3

Query: 245 IEKYYLI*RFPAAKVTKIRR*SLMRAVAYCVPASVFLFYVINTSILKNTPFYFMQFRSFS 66
           IEKYY I  F    V      S +  + Y + +S F    I  S   N  FYF + R+ +
Sbjct: 326 IEKYYNILYFCRIMVYLN---SAINPILYNLMSSKFRTGFIICSE-SNRKFYFKRARNGT 381

Query: 65  FRYKDASCRIPAARGS 18
           F     SCR    R +
Sbjct: 382 FSTTANSCRSSTFRNN 397


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +2

Query: 275 PLSLRHSNCRINEIGI-HLLAYNVL 346
           P+S ++SN   ++IGI   +AY V+
Sbjct: 24  PISYKNSNVNYSKIGIVQTVAYFVI 48


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 162 VLRSGVRIPFLCYKYKYS*KHTLLFYAI 79
           +L S V +      Y Y+  H   F+AI
Sbjct: 53  ILTSSVTLHVCFNSYMYAFTHIFFFFAI 80


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 77  RSFSFRYKDASCRIPAA 27
           RSF  RYKD + ++  A
Sbjct: 194 RSFKSRYKDLNQKLETA 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,436
Number of Sequences: 336
Number of extensions: 1660
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)