Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0113
(411 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37372 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 36 0.32
UniRef50_Q11XR5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 33 3.0
UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot... 32 4.0
UniRef50_UPI0000D8A037 Cluster: hypothetical protein eimer1508.t... 32 5.2
UniRef50_Q9YVI8 Cluster: ORF MSV254 leucine rich repeat gene fam... 31 6.9
UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 - ... 31 6.9
UniRef50_Q54LW7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q54CJ7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID s... 31 9.1
UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4... 31 9.1
>UniRef50_Q37372 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=3; Eukaryota|Rep: NADH-ubiquinone oxidoreductase chain
5 - Acanthamoeba castellanii (Amoeba)
Length = 675
Score = 35.9 bits (79), Expect = 0.32
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 68 YFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIFNMI 196
YFV++ ++V++ + FF+Y ++ L K N+F+FN++
Sbjct: 536 YFVIYDYTVFVVKNKFFRYAYFFLAKKWYFDLLYNNIFVFNLL 578
>UniRef50_Q11XR5 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 278
Score = 32.7 bits (71), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 53 KNINFYFVVFKFSVYIYTSFFFKYHHY*LYKSMLP 157
KN + YF VFKF + Y F F+ Y K +LP
Sbjct: 167 KNKHDYFCVFKFPINDYVDFLFQAKEYTYLKEILP 201
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 32.7 bits (71), Expect = 3.0
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Frame = +2
Query: 56 NINFYFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNV-----FIFNMIVNS**LI* 220
N + + +FK++ Y Y KY+ Y +Y + + +K+N+ FI N+ N+ I
Sbjct: 592 NFLYLYEIFKYNWYKYLLLNNKYNLYIIYNNYIKYLYKYNININLYFIKNLFYNNNNFIH 651
Query: 221 D----DSMYIIFKNTIKISLIPK-ISSNPNYFYGGEWKNK*RKIMFTI-LNN*KIIALTV 382
+ + Y I+ N + + K I N N Y + N ++ + LN+ I ++
Sbjct: 652 NHIIYKNNYYIYNNNMNLYQYNKNILINNNLLYNKLFYNYINNNIYNLYLNDITIGLQSI 711
Query: 383 NMLY 394
N+++
Sbjct: 712 NIIF 715
>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
protein, putative; n=4; Mycoplasma|Rep:
Metallo-beta-lactamase superfamily protein, putative -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 688
Score = 32.3 bits (70), Expect = 4.0
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +2
Query: 56 NINFYFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIFNMIVN 202
N++F V+ ++++ +T FF+K + + +++ F VF+ + + N
Sbjct: 215 NLSFLIVISSYNIHFFTKFFYKLNTKFKWTTIITYLFYLIVFLLSYLAN 263
>UniRef50_UPI0000D8A037 Cluster: hypothetical protein
eimer1508.tmp20; n=1; Eimeria tenella|Rep: hypothetical
protein eimer1508.tmp20 - Eimeria tenella
Length = 638
Score = 31.9 bits (69), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 65 FYFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIFN 190
F+F F F + + FFFK+ + IFF VFIFN
Sbjct: 50 FFFFFFFFFFFFFFFFFFKFTFIFFFFIFFFIFFFIFVFIFN 91
>UniRef50_Q9YVI8 Cluster: ORF MSV254 leucine rich repeat gene family
protein, similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854; n=1; Melanoplus sanguinipes
entomopoxvirus|Rep: ORF MSV254 leucine rich repeat gene
family protein, similar to Amsacta moorei entomopoxvirus
Q3 ORF SW:P28854 - Melanoplus sanguinipes entomopoxvirus
(MsEPV)
Length = 333
Score = 31.5 bits (68), Expect = 6.9
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -3
Query: 346 CKHYFSSFIFPFASVKIIRIGRNFGY*TNFDCIFKDYIHTIILN*LS*INYHIKNKDVKL 167
CK Y FI +++I+ + RN+ Y DC I + L INY NK + L
Sbjct: 204 CKIYNFKFIEKLKNLQILNLSRNYVYSNINDCNLPITIKKLTLGFFKDINYKFINKLLNL 263
Query: 166 K 164
+
Sbjct: 264 E 264
>UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 -
Tetrahymena pyriformis
Length = 1386
Score = 31.5 bits (68), Expect = 6.9
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 83 KFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIFNMIVNS**LI*DDSMYIIFKNTIKI 262
K+ + Y + KY++Y Y ++ + +K+N +++N+I+ D + II N IK
Sbjct: 530 KYLEHKYIYYITKYNNYMQYIKLINVNYKYNKYLYNLIIY-------DFIAIIINNLIK- 581
Query: 263 SLIP 274
+++P
Sbjct: 582 NILP 585
>UniRef50_Q54LW7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 76
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 68 YFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKF 172
YF F F Y Y FF Y + L+K ++ + FKF
Sbjct: 6 YFYYFNFYFYFYFYFFCNYFFF-LFKQIVHLIFKF 39
>UniRef50_Q54CJ7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 102
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 62 NFYFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIF 187
N+Y+ F F +Y + +FF YH + K + + FN+F+F
Sbjct: 7 NYYYYYF-FFIYFFYFYFFYYHDINVLKRVY-LLLLFNIFMF 46
>UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID
subunit; n=3; Eukaryota|Rep: Transcription initiation
factor TFIID subunit - Dictyostelium discoideum AX4
Length = 3004
Score = 31.1 bits (67), Expect = 9.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 65 FYFVVFKFSVYIYTSFFFKYHHY*LYKSMLPIFFKFNVFIFNMIVNS 205
F+F F F +I+ FFF Y ++ + FF F F F + NS
Sbjct: 878 FFFYFFFFIYFIFFIFFFFYFYFIFIFFFIFSFFNFFFFFFFNLWNS 924
>UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4
protein - Plasmodium falciparum
Length = 208
Score = 31.1 bits (67), Expect = 9.1
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 74 VVFKFSVYIYTSFFFKYHHY*LY---KSMLPIFFKFNVFIFNM--IVNS**LI*DDSMYI 238
+++K+++YIY S +KY+ +Y K + + F + I N+ I+N+ I +D YI
Sbjct: 149 LIYKYNIYIYISNLYKYNFIKIYSYNKYFIICIYNFKIKILNINNILNNILYIYNDIYYI 208
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,439,448
Number of Sequences: 1657284
Number of extensions: 4381844
Number of successful extensions: 8513
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8405
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -