Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0112
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.25 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.25 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.25 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.25 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   1.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   3.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   4.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   4.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   7.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   9.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.5  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 266 PDHLTAPPTDPKFPP 222
           P H++    DPKFPP
Sbjct: 19  PQHISGVVVDPKFPP 33


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 266 PDHLTAPPTDPKFPP 222
           P H++    DPKFPP
Sbjct: 19  PQHISGVVVDPKFPP 33


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 266 PDHLTAPPTDPKFPP 222
           P H++    DPKFPP
Sbjct: 19  PQHISGVVVDPKFPP 33


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 266 PDHLTAPPTDPKFPP 222
           P H++    DPKFPP
Sbjct: 19  PQHISGVVVDPKFPP 33


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 185 LSVNYKFPIPDLKVGTLD 238
           L +NYK   PDLK   LD
Sbjct: 128 LEINYKLIDPDLKELNLD 145


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 154 YPEQCHQIRQPQCQ 195
           YP +C  I +P CQ
Sbjct: 29  YPPRCPPIYEPSCQ 42


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 210 FLTLRWELWISWWGCQMIWASLTLSS 287
           FLT R +LW+SW     ++  L L +
Sbjct: 377 FLT-RGDLWLSWEEGMKVFEELLLDA 401


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +2

Query: 227 GTLDQLVGLSDDLGKLDT---FVEGVTRKVAQYLG 322
           GT  QL+ L  D GKL     F E  +R++    G
Sbjct: 104 GTTSQLIELLGDAGKLLASVHFAESQSRRILASAG 138


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 183 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTT 85
           +P L +LFR S++C    S     + + ++F T
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFT 173


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 183 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTT 85
           +P L +LFR S++C    S     + + ++F T
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFT 173


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 183 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTT 85
           +P L +LFR S++C    S     + + ++F T
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFT 173


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 183 LPDLVALFRVSQVC*QVLSPGALITQYSVIFTT 85
           +P L +LFR S++C    S     + + ++F T
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFT 173


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 189 VSTINSLFLTLRWELW 236
           +S +NSL LTL+ + W
Sbjct: 147 LSNVNSLTLTLKRKKW 162


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 189 VSTINSLFLTLRWELW 236
           +S +NSL LTL+ + W
Sbjct: 73  LSNVNSLTLTLKRKKW 88


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 148 LGYPEQCHQIRQPQ 189
           L YPE C ++  PQ
Sbjct: 328 LSYPEVCVKLANPQ 341


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 293 HLRRKCQAC 267
           ++RRKCQ C
Sbjct: 235 YMRRKCQEC 243


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   GTRVLWFRQNYLLFQIIYYK 63
           GT V  F+  +  FQ+ YY+
Sbjct: 144 GTEVAKFKNMWTRFQLKYYQ 163


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   GTRVLWFRQNYLLFQIIYYK 63
           GT V  F+  +  FQ+ YY+
Sbjct: 144 GTEVAKFKNMWTRFQLKYYQ 163


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 281 FVEGVTRKVAQYLGE 325
           FVEG TRK A  L +
Sbjct: 269 FVEGTTRKQAVTLND 283


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 286 RRCDQEGSPVPWR 324
           RRC++     PWR
Sbjct: 235 RRCEEPTEEKPWR 247


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 148 LGYPEQCHQIRQPQ 189
           L YPE C  +  PQ
Sbjct: 336 LSYPEICTLLNDPQ 349


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = -3

Query: 260 HLTAPPTDPKFPP*G 216
           H   PP  P FP  G
Sbjct: 690 HADLPPVPPNFPTCG 704


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,357
Number of Sequences: 336
Number of extensions: 2091
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)