Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0112
         (376 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015974-1|AAV36859.1|  836|Drosophila melanogaster RE74713p pro...   170   4e-43
AY102676-1|AAM27505.1|  388|Drosophila melanogaster LD12844p pro...   170   4e-43
AY061038-1|AAL28586.1|  388|Drosophila melanogaster HL07758p pro...   170   4e-43
AF006655-1|AAB62571.1|  388|Drosophila melanogaster V-ATPase C s...   170   4e-43
AE013599-2255|AAF58013.3|  714|Drosophila melanogaster CG8048-PD...   170   4e-43
AE013599-2254|AAF58012.1|  442|Drosophila melanogaster CG8048-PC...   170   4e-43
AE013599-2253|AAM68515.1|  388|Drosophila melanogaster CG8048-PB...   170   4e-43
AE013599-2252|AAF58011.1|  388|Drosophila melanogaster CG8048-PA...   170   4e-43
AY070918-1|AAL48540.1|  437|Drosophila melanogaster RE02644p pro...    28   4.5  
AE014296-497|AAF47673.1|  437|Drosophila melanogaster CG1246-PB ...    28   4.5  
AE014297-2629|AAF55638.2|  237|Drosophila melanogaster CG5835-PA...    27   5.9  
AY069656-1|AAL39801.1|  236|Drosophila melanogaster LD43057p pro...    27   7.9  
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ...    27   7.9  

>BT015974-1|AAV36859.1|  836|Drosophila melanogaster RE74713p
           protein.
          Length = 836

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AY102676-1|AAM27505.1|  388|Drosophila melanogaster LD12844p
           protein.
          Length = 388

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AY061038-1|AAL28586.1|  388|Drosophila melanogaster HL07758p
           protein.
          Length = 388

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AF006655-1|AAB62571.1|  388|Drosophila melanogaster V-ATPase C
           subunit protein.
          Length = 388

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AE013599-2255|AAF58013.3|  714|Drosophila melanogaster CG8048-PD,
           isoform D protein.
          Length = 714

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AE013599-2254|AAF58012.1|  442|Drosophila melanogaster CG8048-PC,
           isoform C protein.
          Length = 442

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AE013599-2253|AAM68515.1|  388|Drosophila melanogaster CG8048-PB,
           isoform B protein.
          Length = 388

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AE013599-2252|AAF58011.1|  388|Drosophila melanogaster CG8048-PA,
           isoform A protein.
          Length = 388

 Score =  170 bits (414), Expect = 4e-43
 Identities = 80/95 (84%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +2

Query: 95  MTEYWVISAPGDKTCQQTWDTLNNAT-KSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGK 271
           M+EYW+ISAPGDKTCQQT+DT+NN T K  NL  NYKF IPDLKVGTLDQLVGLSDDLGK
Sbjct: 2   MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGK 61

Query: 272 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
           LDT+VE +TRKVA YLGEVLEDQRDKLHENLMANN
Sbjct: 62  LDTYVEQITRKVANYLGEVLEDQRDKLHENLMANN 96


>AY070918-1|AAL48540.1|  437|Drosophila melanogaster RE02644p
           protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 284 RKCQACPDHLTAPPTDPKFP 225
           R  +A PDHL  PP++P+ P
Sbjct: 342 RTTEAHPDHLNYPPSEPQTP 361


>AE014296-497|AAF47673.1|  437|Drosophila melanogaster CG1246-PB
           protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 284 RKCQACPDHLTAPPTDPKFP 225
           R  +A PDHL  PP++P+ P
Sbjct: 342 RTTEAHPDHLNYPPSEPQTP 361


>AE014297-2629|AAF55638.2|  237|Drosophila melanogaster CG5835-PA
           protein.
          Length = 237

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 152 DTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEG 292
           D LN+AT    L+ NYK+ +  L+ G  DQ     DD+  L+   +G
Sbjct: 90  DQLNSATNLV-LAQNYKYDVEILESGDADQDDSSMDDVDDLEERFKG 135


>AY069656-1|AAL39801.1|  236|Drosophila melanogaster LD43057p
           protein.
          Length = 236

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 130 VARGTDHPVFSHFHH 86
           +ARG DHP F  +HH
Sbjct: 195 LARGGDHPNFGQYHH 209


>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
           protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +2

Query: 107 WVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDL 220
           WV+    D++ +Q W  + +  K    ++  +FPIP++
Sbjct: 173 WVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNI 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,673,415
Number of Sequences: 53049
Number of extensions: 361914
Number of successful extensions: 894
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)